Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01591 ATGTTCCAAAAGTCTAGTCAACCTCGGCAACAGCAACAACAAAAGCAAAAAGGGGAATGGTTATCAGGAAGTTTCAAGCCAGAGAACTTCATCCCAGGTCTTGTCATTGGTTTCATTTTTGGGTTGTTGTTGGATTTAACAAAGCCCAATAAAAATCACTCGTCCAAGAAAAGTTTATCATCTAGCAAGCCTCATCAGCAACTCTCAGTCTCAAGCAATGGTGATCAAGAGCTTAAAATGGTTCTGGTTGTTAGGCAAGACCTAAAGATGAAATCTGGAAAGATTGCATCCCAATGTGCTCATGCTGCCACTGGCATGTACGCTGAATTAATGCAAAGTGACCGGTCTCTTTTAAGACAATGGGAACAGTGTGGCCAGCCCAAAATTGTTGTGACTTGTAGGAACCAACAAGAAATGAATAAGCTGAAGGAAGCAGCTGAGAGTATTGGCCTCCCTACTTTTGTTGTTGCTGATGCTGGACGAACGCAGGTTTTGGCAGGATCAAAGACTGTTCTTGCTGTTGGACCTGGACCAAAATCATCTGTGGATTCGGTGACTGGGAGGTTGCCCCTGCTTTGA 579 0.4387 MFQKSSQPRQQQQQKQKGEWLSGSFKPENFIPGLVIGFIFGLLLDLTKPNKNHSSKKSLSSSKPHQQLSVSSNGDQELKMVLVVRQDLKMKSGKIASQCAHAATGMYAELMQSDRSLLRQWEQCGQPKIVVTCRNQQEMNKLKEAAESIGLPTFVVADAGRTQVLAGSKTVLAVGPGPKSSVDSVTGRLPLL* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01591 192 CDD PTH2 79 192 IPR002833 GO:0004045
Rops10g01591 192 MobiDBLite consensus disorder prediction 1 21 - -
Rops10g01591 192 MobiDBLite consensus disorder prediction 51 72 - -
Rops10g01591 192 MobiDBLite consensus disorder prediction 1 20 - -
Rops10g01591 192 Pfam Peptidyl-tRNA hydrolase PTH2 78 192 IPR002833 GO:0004045
Rops10g01591 192 SUPERFAMILY Peptidyl-tRNA hydrolase II 77 192 IPR023476 -
Rops10g01591 192 MobiDBLite consensus disorder prediction 53 72 - -
Rops10g01591 192 Gene3D Bit1 73 192 IPR023476 -
Rops10g01591 192 PANTHER PEPTIDYL-TRNA HYDROLASE 2 10 192 IPR002833 GO:0004045
Rops10g01591 192 FunFam Peptidyl-tRNA hydrolase 2, mitochondrial 76 192 - -
Rops10g01591 192 NCBIfam aminoacyl-tRNA hydrolase 78 192 IPR002833 GO:0004045
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01591 Rops-Chr10 29397968 29401397 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01591 K04794 - gmx:100527852 290.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01591 10 29397968 29401397 Rops10g01591 10 29397968 29401397 ECH