Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01590 ATGGAGTCTGTGGCCTCCAATTCTAATTCACCACCCAACCATAACAATAACAATAACAATAACCATAACCACCACCACCATAGGTTCAAACCAAGCCAACCCATTTCAGATAGAATAGTTAGAGCCCTCCGGCACCGGCTCCGTCTTCTCCACCGTTCTGGTTCCACCTTCTTCATATTAGGCGCCACTGGAAATGTCTACACAGTGAACTTATCCTCCACACCCTCATGCACATGCCCTGACCGCACAACCCCATGCAAGCACATTCTATTTGTTTTCATTCGAGTTTTGGGTGTGTCCCTTGATGATGTGTGTCTCAGGAGAAGGACCCTTCGCCCTTGCCAGCTTCAACGCCTTCTTAGCATGCCCACATTGCCAGAAGCAGTTGCAGGTGGCACCCTACGCCAGAGGTTTCACCAGCTTTTCTTTGAGGGAAGACAAGGAAGAGGGTCAAGCATAGAGATGGAGGATGGTGCAACATGCCCCATTTGCCTTGAGGAGATGGGGAAGGAAGAAAAATTGGTGGCTTGTGGGACATGTCGTAACCCTATTCATGAAGAGTGTTTGGTGAGGTGGAAGAGAAGTAGGGGAAGAAGATCAACTAGTTGTGTGATTTGTAGGGCAAGGTGGAGGAATAGGATGGAACAGGATAAGTATCTTAATCTATCTGCTTATGTTAGTGAAGATGACATGGGTCAACCTGCTGGGGGTCTTTGCACTGGATAA 726 0.4793 MESVASNSNSPPNHNNNNNNNHNHHHHRFKPSQPISDRIVRALRHRLRLLHRSGSTFFILGATGNVYTVNLSSTPSCTCPDRTTPCKHILFVFIRVLGVSLDDVCLRRRTLRPCQLQRLLSMPTLPEAVAGGTLRQRFHQLFFEGRQGRGSSIEMEDGATCPICLEEMGKEEKLVACGTCRNPIHEECLVRWKRSRGRRSTSCVICRARWRNRMEQDKYLNLSAYVSEDDMGQPAGGLCTG* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01590 241 ProSiteProfiles Zinc finger SWIM-type profile. 67 97 IPR007527 GO:0008270
Rops10g01590 241 MobiDBLite consensus disorder prediction 1 33 - -
Rops10g01590 241 ProSiteProfiles Zinc finger RING-type profile. 161 207 IPR001841 -
Rops10g01590 241 PANTHER RING FINGER AND SWIM DOMAIN-CONTAINING PROTEIN 2 13 215 IPR039903 GO:0061630
Rops10g01590 241 SUPERFAMILY RING/U-box 153 216 - -
Rops10g01590 241 Pfam Ring finger domain 160 207 IPR001841 -
Rops10g01590 241 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 148 224 IPR013083 -
Rops10g01590 241 ProSiteProfiles Zinc finger RING-CH-type profile. 153 213 IPR011016 GO:0008270
Rops10g01590 241 MobiDBLite consensus disorder prediction 1 19 - -
Rops10g01590 241 Pfam SWIM zinc finger 67 95 IPR007527 GO:0008270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01590 - - var:108321788 387.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01590 10 29391104 29391979 Rops10g01590 10 29391104 29391979 ECH