Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01573 ATGTCAGTGAGCTTCAGTACCTCTGGCTCTAAAAGCTCAGTTCATCAGCTGGAGAACATAGATGAGAATGCTCCTGCAGATTGGCCTGCATCATCTTGTCCCCCGCCTGATACTCCAACTGAATCTATGGAGTTCCTTGCTAGATCATGGAGTCTTTCAGCCATGGAACTCTCCAAAGCACTGCACTGCACCAATATTATGACCTCCACTGAGATGCCTCTTTCATGCCCTTCTGGTAACCAATTATATACCAAGGGTGCCACTGCTTCAAAGGATTCTTTATCTAACGGATGTTGCCCTCCAATTTCACCAAAAGTCAGTGACGAAAAGAAGGATTTATTTTTACTCCATCAAGCAATGAATCCAGAATTCCTTTACAGTCAAAACATGCTCAGAAATGGGCTTTACAGGAGCTTGCTAAGAGGGAGGACAATGGGTAGGTGGATGAAAGATCAGAAGGAAAGGAAAAAGCAAGAAATTAGAACCCATAATGCTCAGTTGCATGCTGCAGTATCTGTGGCTGGTGTTGCTGCCGCTGTTGCAGCAGTTGCAGCTTCAATAGCATCACCTGAAATGCCTAATGCCAATCAAAAGAACTCTCCCTTTGCTTCCGGTACAATTGCATCTGCAGCAGCTTTAGTAGCCTCTCACTGCATTGAGATTGCAGAAGATATGGGGGCTGAACACGACCAAATCATAGCAGCGGTCAACTCTGCCATTAATGCAAAAGCCAATGGAGATATTATGGCTCTAACAGCCGGAGCAGCCACAGCCTTACGGGGAGCTGCTACTCTAAAGGCTAGGCTGCAAAAAGGGCTTGGTGCCACTACAATTCCTCTAGTTGAGGAAAAGTGTGATGAAGGTAAAGAAGCAAGCATCTTGACAGCACTGGACTGTGTCTTTAGAGGAGGAGAACTACTCAAACGTACAAGAAAAGGAGATCTTCACTGGAAGCAAGTTTCTTTCAATATAAATTCAAATTTGCAGGTCGTAGCCAAAATGAAAAGCAAGCATATGGCAGGAACATTCACGAAAAAGAAGAAATATATAGTTACTGGAGTTTGCAGTGATATCCCAGCTTGGCCCGGAAGGGAGAATGAAGATATCAGTGAAAAGAGGGCATATTTTGGAATAAAAACAGTAGACAGGATAATAGAATTTGAATGTGGAAGTAAAGGAGACAAACAGTTCTGGCTTGAGGGGATCCAGCACATGTTGAATTGCTGTGCCAAAGTAACATAA 1242 0.438 MSVSFSTSGSKSSVHQLENIDENAPADWPASSCPPPDTPTESMEFLARSWSLSAMELSKALHCTNIMTSTEMPLSCPSGNQLYTKGATASKDSLSNGCCPPISPKVSDEKKDLFLLHQAMNPEFLYSQNMLRNGLYRSLLRGRTMGRWMKDQKERKKQEIRTHNAQLHAAVSVAGVAAAVAAVAASIASPEMPNANQKNSPFASGTIASAAALVASHCIEIAEDMGAEHDQIIAAVNSAINAKANGDIMALTAGAATALRGAATLKARLQKGLGATTIPLVEEKCDEGKEASILTALDCVFRGGELLKRTRKGDLHWKQVSFNINSNLQVVAKMKSKHMAGTFTKKKKYIVTGVCSDIPAWPGRENEDISEKRAYFGIKTVDRIIEFECGSKGDKQFWLEGIQHMLNCCAKVT* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01573 413 Pfam Auxin canalisation 36 277 IPR008546 -
Rops10g01573 413 SUPERFAMILY PH domain-like 289 408 - -
Rops10g01573 413 PANTHER EXPRESSED PROTEIN 27 410 IPR040269 -
Rops10g01573 413 Pfam Plant pleckstrin homology-like region 305 408 IPR013666 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01573 Rops-Chr10 29181964 29185300 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01573 - - gmx:100814154 660.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01573 10 29181964 29185300 Rops10g01573 10 29181964 29185300 ECH