Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01545 ATGGCTCCACCACCACCACAGTCTCAGCGATCTCCCTCACCGTCGCAACCATCCGGGAAGAGTGAAGTCTCTGATCTGAAATTACAGCTCCGGCAGCTTGCAGGGAGCCGAGCTCCGGGGGTTGATGATTCTAAGAGGGATCTCTTCAAGAAGGTGATATCCAATATGACTATAGGTATTGATGTTTCATCTCTCTTTGGTGAGATGGTAATGTGCTCGGCGACATCGGATATTGTTCTTAAGAAAATGTGCTACCTATATGTTGGGAACTATGCAAAGGTCAATCCTGATCTTGCTCTTTTGACGATTAATTTTCTTCAAAGAGATTGCAAGGATGCGGATCCGATGATTCGGGGATTAGCATTGAGGAGTTTGTGTTCACTCCGAGTGGCAAACTTGGTGGAGTACTTGGTCGGGCCATTAGGGTCTGGGTTGAAGGACAATAATAGTTATGTCAGGACAGTGGCAGTTATTGGGGTTTTGAAGCTATATCATATATCAGCTTCCACCTGTATTGATGCAGATTTTCCAGCAACCCTGAAGCATTTGATGCTTAATGACCCAGATACTCAGGTAGTCGCAAATTGTTTGTCTGCTTTACAAGAAATTTGGACCTTAGAGTCAACCACATCAGAGGAAGCAGCCAGGGAGAGAGAAACTCTGCTTAGCAAGCCACTTGTATATCACCTTCTCAATCGCATTAAGGAATTTAGTGAATGGGCACAATGTCTCGTGCTGGAATTGGTGGCCAAGTACATTCCGTCAGATAGCAATGAAATATTTGATATGATGAATCTCCTTGAAGACAGACTCCAGCATGCAAATGGTGCTGTTGTCTTGGCAACCGTAAAAGTATTTCTACAGTTGACTTTATCTATGGCCGATGTTCATCAGCAGGTTTATGAGCGTATCAAAGCCCCTCTCTTAACTCAAGTGAGCTCAGGAAGTCCAGAACAATCTTATGCAATTTTAAGCCACTTGCATCTCTTGGTCATGCGTGCACCTTATATATTTTCCTCAGACTACAAACACTTCTATTGCCAGTATAATGAGCCATCATATGTCAAAAAGTTGAAGCTTGAAATGCTGACTGCAGTTGCAAATGAAAGTAACACTTATGAGATAGTGACTGAATTATGTGAATATGCTGCAAATGTTGACATTCCAATTGCAAGGGAGTCAATTCGTGCTGTTGGGAAGATAGCATTGCAGCAGTATGATGTCAATGCTATTGTTGATCGACTTCTACAGTTTCTTGAGATGGAAAAGGACTATGTTACTGCTGAAGCTCTGGTGCTTGTGAAAGATCTGCTAAGAAAATATCCACAATGGAGTCAGGATTGTATTGCTGTTGTGGGGAATATCAGTAGCAAAAATGTCCAAGAACCCAAGGCCAAGGCAGCTCTTATATGGATGTTGGGGGAATATTCTCAGGATATGCATGATGCTCCTTATGTCTTGGAGAGTATAGTGGAAAATTGGGATGAGGAGCATTCTGCTGAGGTTCGCTTACATCTTCTAACTGCAGTTATGAAGTGTTTCTTCAAAAGACCACCTGAGACTCAGAAAGCATTAGGTGCTGCATTAGCTGCTGGTATTGCTGATTTTCACCAGGATGTTCATGATAGGGCCTTATTTTATTACAGGCTTCTGCAATACAAAGTATCAGTGGCAGAGAGTGTGGTGAACCCTCCAAAGCAAGCAGTTTCAGTATTTGCTGATACTCACAGCAGTGAAATCAAAGATCGCATATTTGATGAATTTAACAGTTTGTCTGTTGTATACCAAAAGCCTTCATACATGTTCACTGATAAGGAACACCGAGGGACGTTTGAGTTTTCAGACGAACTGGGAAATCTATCTATTAGTGCAGAATCTGGAGATTCTGTTGTTCCAGCTCAGAGAGTGGAGGCAAATGACAAGGATCTGCTCCTAAGTACCACAGAAAAAGAGGAAGGTAGAGATCCTGGCAGCAATGATTCTGTCTACAATGCTCCTTCCTTTAATGGCTCATCTGCCCCTTCTGCAACTTCACAACCCCTTGCAGATTTGGCATTTTCGAGTACCAGTGTAACTGGTCAAGCTCCTGCATCTAGCATGGCAATCGATGATCTGCTTGGTTTAGATTTTCCAGCTGGGCCTGCAGCCACAGCTTCACCTCCTCCATTGAACCTCAACCCAATAGCTGTACTGGATCCTGGCACATTTCAGCAGAAATGGCGTCAGCTGCCAATATCTTTATCAGAGGAATATTCTATAAGTCCTCAAGGAATTGCATTGTTGACAACTCCGCATACACTCCTCCGGCACATGCAAAGTCATTTGATACAATGTATTGCATCCGGTGGTCAGTCTCCTAACTTCAAGTTCTTTTTCTTTGCTCAAAAAGCAGAAGAAGCATCAATGTATCTTGTAGAGTGTATAATCAACACATCGTCAGCCAAGTCACAGATTAAAATAAAAGCGGATGATCAAAGTTCATCCCAGGCATTCTCAACTTTATTCCAATCAGCCTTGTCCAAATTCGGTTCTCCTTAA 2538 0.4279 MAPPPPQSQRSPSPSQPSGKSEVSDLKLQLRQLAGSRAPGVDDSKRDLFKKVISNMTIGIDVSSLFGEMVMCSATSDIVLKKMCYLYVGNYAKVNPDLALLTINFLQRDCKDADPMIRGLALRSLCSLRVANLVEYLVGPLGSGLKDNNSYVRTVAVIGVLKLYHISASTCIDADFPATLKHLMLNDPDTQVVANCLSALQEIWTLESTTSEEAARERETLLSKPLVYHLLNRIKEFSEWAQCLVLELVAKYIPSDSNEIFDMMNLLEDRLQHANGAVVLATVKVFLQLTLSMADVHQQVYERIKAPLLTQVSSGSPEQSYAILSHLHLLVMRAPYIFSSDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIVTELCEYAANVDIPIARESIRAVGKIALQQYDVNAIVDRLLQFLEMEKDYVTAEALVLVKDLLRKYPQWSQDCIAVVGNISSKNVQEPKAKAALIWMLGEYSQDMHDAPYVLESIVENWDEEHSAEVRLHLLTAVMKCFFKRPPETQKALGAALAAGIADFHQDVHDRALFYYRLLQYKVSVAESVVNPPKQAVSVFADTHSSEIKDRIFDEFNSLSVVYQKPSYMFTDKEHRGTFEFSDELGNLSISAESGDSVVPAQRVEANDKDLLLSTTEKEEGRDPGSNDSVYNAPSFNGSSAPSATSQPLADLAFSSTSVTGQAPASSMAIDDLLGLDFPAGPAATASPPPLNLNPIAVLDPGTFQQKWRQLPISLSEEYSISPQGIALLTTPHTLLRHMQSHLIQCIASGGQSPNFKFFFFAQKAEEASMYLVECIINTSSAKSQIKIKADDQSSSQAFSTLFQSALSKFGSP* 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01545 845 MobiDBLite consensus disorder prediction 660 676 - -
Rops10g01545 845 MobiDBLite consensus disorder prediction 628 676 - -
Rops10g01545 845 SUPERFAMILY ARM repeat 31 599 IPR016024 -
Rops10g01545 845 PIRSF Beta_adaptin 11 844 IPR016342 GO:0015031|GO:0030276
Rops10g01545 845 Gene3D - 15 610 IPR011989 -
Rops10g01545 845 MobiDBLite consensus disorder prediction 642 657 - -
Rops10g01545 845 SMART B2_adapt_app_C_2 723 840 IPR015151 GO:0006886|GO:0016192|GO:0030131
Rops10g01545 845 MobiDBLite consensus disorder prediction 1 24 - -
Rops10g01545 845 Pfam Adaptin N terminal region 41 552 IPR002553 GO:0006886|GO:0016192|GO:0030117
Rops10g01545 845 Pfam Beta2-adaptin appendage, C-terminal sub-domain 729 839 IPR015151 GO:0006886|GO:0016192|GO:0030131
Rops10g01545 845 PANTHER ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER 16 810 IPR026739 GO:0016192
Rops10g01545 845 FunFam Beta-adaptin-like protein 714 843 - -
Rops10g01545 845 Gene3D - 715 844 IPR012295 -
Rops10g01545 845 FunFam Beta-adaptin-like protein A 14 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01545 Rops-Chr10 28815747 28826502 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01545 - - gmx:100801153 1522.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01545 10 28815747 28826502 Rops10g01545 10 28815747 28826502 ECH