Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01544 ATGGTTCTTCTTCACCTCCCAAGGTTCCCCTTCTCCCTTCTAACCTCACCTCATTCATTCTCTTTCCGTGCCTCCAGAAACACCCTTTTTTATGCACCCAAATCCACTCTCACCACCGCAGAACCCATAACCCCTTCTTCCCCTCCACAGTTATCCCTCGAGAAACTCTTCATTCCACCGGAGACCCATGTCTCCCTCGACACTTCCAGAATCTTGAACGGTTCCAACATAGTGCTGAGTAACTACGCCAATGATGCTCAAGTCTTACAAGCCGAGTTTGTCAAAAGCAGTGTCAGAACCGAAGATTGCCCCTCCGATGGCCTCCCTGAGTTCGCTCTCGTTGGACGCTCCAACGTCGGAAAATCATCACTCCTCAATTCCCTTGTTCGCAGAAAGAAACTCGCCTTAACTTCAAAGAAACCTGGCAAGACCCAATGCATTAACCATTTTAGGATTAATGATAGCTGGTACCTGGTTGATTTGCCTGGATATGGGTATGCATCTGCACCGCAGGAACTTAGAATGGATTGGGAGAAATTTACCAAAGACTACTTCCTTAACCGATCAACCTTAGTTTCAGTTTTCCTTCTAATAGATGCTAGCATTCCTGCTAAAAAAAAAGATCTTGACTATGCCAGTTGGTTGGGTCAGAATCAGATCCCAATGACATTAATCTTCACCAAATGTGACAAACGGAAGAAGAAAAAGAATGGAGGCAAAAGACCAGAAGAAAATGTCAATGATTTTCAGGGCTTGATACGTGGCTTCTTCCAAACAGTGCCTCCATGGATCATGACCAGCAGTGTCACCAATCAGGGTCGTGATGAGATACTCCTCCATATGGCTCAGCTACGAAACTACTGGCTCAAGCACTAG 876 0.4578 MVLLHLPRFPFSLLTSPHSFSFRASRNTLFYAPKSTLTTAEPITPSSPPQLSLEKLFIPPETHVSLDTSRILNGSNIVLSNYANDAQVLQAEFVKSSVRTEDCPSDGLPEFALVGRSNVGKSSLLNSLVRRKKLALTSKKPGKTQCINHFRINDSWYLVDLPGYGYASAPQELRMDWEKFTKDYFLNRSTLVSVFLLIDASIPAKKKDLDYASWLGQNQIPMTLIFTKCDKRKKKKNGGKRPEENVNDFQGLIRGFFQTVPPWIMTSSVTNQGRDEILLHMAQLRNYWLKH* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01544 291 Hamap Probable GTP-binding protein EngB [engB]. 96 285 IPR019987 GO:0005525
Rops10g01544 291 ProSiteProfiles EngB-type guanine nucleotide-binding (G) domain profile. 107 287 IPR030393 GO:0005525
Rops10g01544 291 Gene3D - 83 287 IPR027417 -
Rops10g01544 291 PANTHER MSS1/TRME-RELATED GTP-BINDING PROTEIN 42 291 - -
Rops10g01544 291 CDD YihA_EngB 110 284 IPR030393 GO:0005525
Rops10g01544 291 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 103 287 IPR027417 -
Rops10g01544 291 Pfam 50S ribosome-binding GTPase 111 228 IPR006073 GO:0005525
Rops10g01544 291 NCBIfam ribosome biogenesis GTP-binding protein YihA/YsxC 91 279 IPR019987 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01544 Rops-Chr10 28804168 28806490 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01544 K03978 - gmx:100784426 493.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01544 10 28804168 28806490 Rops10g01544 10 28804168 28806490 ECH