LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops10g01541	ATGGACTATATCCTTAGAGAAATAGAAGGAAAGCAAGCTCATGACCCTTTATTCATTGATAAAATGAATCATAACAAGAGTGAAAGATGTGTGTGGGTTCCAGGGCCTGTGATTGTAGGAGCAGGACCTTCAGGGCTTGCAGCAGCAGCATGTCTCAAAGAGAAAAGTGTGCCATATGTTGTACTAGAGAGATCTAATTGCATAGCTTCTTTGTGGCAGCTTAAGACCTATGATCGTCTACGCCTTCATTTGCCAAAACAATTTTGTGAGCTTCCCTTTATGGGGTTCCCTGATGATTTCCCAACATACCCATCAAAGCAACAGTTCATAAAGTACTTGGAGAGTTATGCAGAGAGATTTGATATTAGGCCAAGGTTCAATGAGACAGTGAAGCATGCTGAATTTGATGCTAAGATTCGTCGTTGGCGCTTGAAGAGTGTTAACAAGGCCGGGATTACGACGGAGTATGTGTGCCAGTGGCTGATTGTGGCAACTGGAGAGAATGCAGAGGCTGTGGTGCCCGGTATTGAAGGAATAGAAGAATTTGGAGCCCCCATAAGGCATACAAGTTTGTATAAGGGTGGTGAAGAATTCAGAGGGAAGAGAGTTTTGGTTGTGGGATGTGGGAATTCAGGTATGGAAGTGTGCTTGGATCTTTGCAACCATAATGCTACTCCATCTCTTGTGGTCAGAGATACAGTACACGTCCTACCACGAGAGATGCTGGGAAAATCAACTTTTGGGTTGTCCATGTGGTTGATGAAGTGGTTTCCCATGCGACTTGTCGATCGGTTCCTGCTCATAGTGTCATGGCTTATGCTCGGTGACACTGCTCGATTCGGATTGGACCGGCCTCGTTTGGGTCCCCTTGAACTCAAAAACATGTCCGGAAAGACCCCTGTGCTAGATGTGGGTACACTTGCCAAGATTAAAGGTGGAGACATTAAGGTACGTCCAGGCATAAAGCGGCTAAAACGTCATACAGTGGAATTTGTAGATGGAAGAACAGAGAATTTTGATGCCATCATATTGGCAACTGGTTACAAAAGCAATGTACCCTATTGGCTTAAGGAGGAGGATATGTTCTCTAAGGAAGATGGATTCCCAAGAAGGCCATTCCCAAATGGGTGGAAAGGTAAAAATAGGCTATATGCGGTGGGTTTTACCAAAAGGGGACTACTTGGTGCATGCATTGATGCAAAGAGAATAGCTGAAGATATTGAACGGTGTTCGGAAGATGAAGCAAAGCCTAGGACTGCTTTTGCTCGTTCAATTTTGCCGCTATCAATTTCATAG	1296	0.4452	MDYILREIEGKQAHDPLFIDKMNHNKSERCVWVPGPVIVGAGPSGLAAAACLKEKSVPYVVLERSNCIASLWQLKTYDRLRLHLPKQFCELPFMGFPDDFPTYPSKQQFIKYLESYAERFDIRPRFNETVKHAEFDAKIRRWRLKSVNKAGITTEYVCQWLIVATGENAEAVVPGIEGIEEFGAPIRHTSLYKGGEEFRGKRVLVVGCGNSGMEVCLDLCNHNATPSLVVRDTVHVLPREMLGKSTFGLSMWLMKWFPMRLVDRFLLIVSWLMLGDTARFGLDRPRLGPLELKNMSGKTPVLDVGTLAKIKGGDIKVRPGIKRLKRHTVEFVDGRTENFDAIILATGYKSNVPYWLKEEDMFSKEDGFPRRPFPNGWKGKNRLYAVGFTKRGLLGACIDAKRIAEDIERCSEDEAKPRTAFARSILPLSIS*	432

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops10g01541	431	Gene3D	-	36	416	IPR036188	-
	Rops10g01541	431	PANTHER	FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220)	37	416	-	-
	Rops10g01541	431	FunFam	Flavin-containing monooxygenase	36	416	-	-
	Rops10g01541	431	Pfam	Flavin-binding monooxygenase-like	38	355	IPR020946	GO:0004499\|GO:0050660\|GO:0050661
	Rops10g01541	431	PRINTS	FAD-dependent pyridine nucleotide reductase signature	202	220	-	-
	Rops10g01541	431	PRINTS	FAD-dependent pyridine nucleotide reductase signature	36	55	-	-
	Rops10g01541	431	SUPERFAMILY	FAD/NAD(P)-binding domain	200	414	IPR036188	-
	Rops10g01541	431	SUPERFAMILY	FAD/NAD(P)-binding domain	37	234	IPR036188	-
	Rops10g01541	431	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	198	222	-	-
	Rops10g01541	431	PRINTS	Pyridine nucleotide disulphide reductase class-II signature	35	57	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops10g01541	Rops-Chr10	28759154	28762441	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops10g01541	K11816		-	gmx:100799546	752.281