Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01529 ATGCCTGAGACTGAGGTAAATCCAACTATCAGCAAGTCAACTGGATTGCCTCGAAAACGCTTCTATCGAGCACGTGCACACAGCAATCCACTAAGTGACTCTCACTTCCCTGTGCCAATATCCCCCAGTCATGTTGATTATTCCCTCCATTACCCTCATTTCTTTCCCTCATCCGCTCAAGCTCATAGTTCCAGAAAGATCAAGTTTGCTGATATTGGCTGTGGTTTTGGTGGGCTGCTCATCAGTCTTTCCACTGTGTTCCCAGAAACACTTATGATTGGAATGGAACTTAGAGATAAAGTGACTGAGTATGTCAAGGAACGGATTTCTTCTTTAAGGGTAGCACATCCAGGTCAATACCAAAATGTTTCTGTGGTGCGGACTAACTCCATGAAGTACATTCCCAATTACTTTGAGAAAGGACAACTGTCGAAGATGTTTTTCTTGTTTCCTGATCCTCATTTTAAAGAGAAGAATCATCGCCGTCGGGTTATCAGTCAGTTCTTACTAGATGAGTATGCTTATGCTCTTGAGGTTAGTGGAATTATATACACAATAACAGATGTAGAAGAACTTGGGGACTGGATGAAGTCTTGTCTGGAGAATCACCCTATGTTTGAGGCCCTGACTGAGAAAGAACTTGAAGCAGATCCAGTTGTGAAACTTTTAAGTTCTGCAACTGAAGAAGGCCAAAAGGTTGCTAGAAATGGGGGACAAACTTTCCAGGCTGTATACAGACGCATTGTGCCATCTGATCAAACATCCTAG 768 0.4284 MPETEVNPTISKSTGLPRKRFYRARAHSNPLSDSHFPVPISPSHVDYSLHYPHFFPSSAQAHSSRKIKFADIGCGFGGLLISLSTVFPETLMIGMELRDKVTEYVKERISSLRVAHPGQYQNVSVVRTNSMKYIPNYFEKGQLSKMFFLFPDPHFKEKNHRRRVISQFLLDEYAYALEVSGIIYTITDVEELGDWMKSCLENHPMFEALTEKELEADPVVKLLSSATEEGQKVARNGGQTFQAVYRRIVPSDQTS* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01529 255 FunFam tRNA (guanine-N(7)-)-methyltransferase 45 247 - -
Rops10g01529 255 Hamap tRNA (guanine-N(7)-)-methyltransferase [METTL1]. 16 248 IPR025763 GO:0008176
Rops10g01529 255 ProSiteProfiles SAM-dependent methyltransferase TRMB-type domain profile. 19 247 IPR003358 GO:0006400|GO:0008176
Rops10g01529 255 Pfam Putative methyltransferase 68 242 IPR003358 GO:0006400|GO:0008176
Rops10g01529 255 Gene3D Vaccinia Virus protein VP39 45 247 IPR029063 -
Rops10g01529 255 NCBIfam tRNA (guanosine(46)-N7)-methyltransferase TrmB 64 247 IPR003358 GO:0006400|GO:0008176
Rops10g01529 255 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 59 240 IPR029063 -
Rops10g01529 255 PANTHER 3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE/TRNA GUANINE-N 7 - -METHYLTRANSFERASE 16 247 IPR003358 GO:0006400|GO:0008176
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01529 Rops-Chr10 28611556 28613673 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01529 K03439 - gmx:100806128 478.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01529 10 28611556 28613673 Rops10g01529 10 28611556 28613673 ECH