Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01520 ATGTCTGATCAGGCAAGAGCAGGGTCCTACTCCTATGGATCAAACTATGACACCAACATGAACAGCCCACCTTCACGCCAAACTGTGAAGTTCTTGACTGCTGCTACTATTGGTGTCACACTGTTGCTCTTGTCTGGTTTAATCCTCACTGGGACTGTCATAGGCTTAATCATTGCAACCCCTCTTCTTGTTTTGTTCAGTCCTATCCTAGTCCCAGCTGCCATAGTCCTATCCCTTGCTGCTGGTGGCTTGTTGTTCTCAGGTGGCTGTGGTGTGGCTGCTATAGCTGCATTGTCATGGATTTATAACTATGTCTCTGGGAACCACCCTGTGGGTTCTGATACTCTTGATTATGCAAAAGGGATGATTGCTGATAAAGCTAGGGATGTGAAGGAAAGGGCCAAGGATTATGGCAGTTATGCTCAGGGTAGAGCACAAGAGGCCACACAAGGGTCTTATTAA 462 0.4697 MSDQARAGSYSYGSNYDTNMNSPPSRQTVKFLTAATIGVTLLLLSGLILTGTVIGLIIATPLLVLFSPILVPAAIVLSLAAGGLLFSGGCGVAAIAALSWIYNYVSGNHPVGSDTLDYAKGMIADKARDVKERAKDYGSYAQGRAQEATQGSY* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01520 153 Pfam Oleosin 27 138 IPR000136 GO:0012511|GO:0016020
Rops10g01520 153 PANTHER OLEOSIN 18 147 IPR000136 GO:0012511|GO:0016020
Rops10g01520 153 ProSitePatterns Oleosins signature. 51 73 IPR000136 GO:0012511|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01520 Rops-Chr10 28514171 28514894 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01520 19 130 Lipid Metabolism Gene Families AT2G25890 64.286 9.92e-42 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01520 - - gmx:100301903 223.787