Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01507 ATGGAGATCCGTGCCGATTCAGAACCCAGCTCCTTTTCAAGTTTGTTCGCAGCAGTGTCATATGGAATTGCCTCAATGGCTATGGTTTTTATCAATAAGGCTGTTATTATGCAGTATGCACACTCAATGACTCTCCTCACTCTGCAGCAATTGGCTACCACCTTGCTTATACACTTTGGTCGAAAAATGGAATATACAAGAGCCAGAGGAGTAGATATGACAATGGCCAAGAAACTTCTCCCGGTTTCAATTTTCTATAATGCCAATGTTGCATTTGCTTTGGCAAGTTTGAAAGGAGTCAATATCCCAATGTATATTGCAATAAAGAGGCTTACGCCACTTGCTGTACTTGTCGCTGGGTGTTTCTTAGGAAAAGGGAGACCTACAACTCAGGTGACTCTATCAGTGATATTGACTGCTGCTGGAGTTCTCATTGCTGCCCTTGGAGATTTTTCCTTTGACCTTCTTGGGTATAGCATGGCCTTCGTTTCTGTTTTTTTCCAGACCATGTACCTTGTGCTTGTGGAAAAATCTGGTGCTGAAGATGGACTTTCATCAGTGGAAATCATGTTCTACAACAGCTTTTTATCTCTTCCATTTTTGATGTTTCTTATCATAGCTACTGGGGAATTCCCAAATTCTTTATCTGTATTATTTGCAAAGAGTTATTCTCTTTCATTTTTGGTGATCGTTATTCTTTCATTGGTGATGGGCATTGTTCTCAACTTCACCATGTTCTTGTGTACTGTTGTCAATTCAGCTCTAACTACAACTATTGTTGGCGTTCTCAAAGGGGTCGGTTCCACGACACTTGGTTTCGTCTTACTGGGTGGTGTTCAAGTCCATGCTTTGAATGTGACTGGATTGGTTATCAATACAGCTGGTGGTGTGTGGTATTCATTTGCTAAATATCAGCAGAAAAAAAATAAGACAGTGAAGCTAGAGACAGATGTGGAGGCTCATCGTAAATAG 972 0.4084 MEIRADSEPSSFSSLFAAVSYGIASMAMVFINKAVIMQYAHSMTLLTLQQLATTLLIHFGRKMEYTRARGVDMTMAKKLLPVSIFYNANVAFALASLKGVNIPMYIAIKRLTPLAVLVAGCFLGKGRPTTQVTLSVILTAAGVLIAALGDFSFDLLGYSMAFVSVFFQTMYLVLVEKSGAEDGLSSVEIMFYNSFLSLPFLMFLIIATGEFPNSLSVLFAKSYSLSFLVIVILSLVMGIVLNFTMFLCTVVNSALTTTIVGVLKGVGSTTLGFVLLGGVQVHALNVTGLVINTAGGVWYSFAKYQQKKNKTVKLETDVEAHRK* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01507 323 Pfam Triose-phosphate Transporter family 24 300 IPR004853 -
Rops10g01507 323 Coils Coil 304 323 - -
Rops10g01507 323 PANTHER SOLUTE CARRIER FAMILY 35 15 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01507 Rops-Chr10 28382145 28386133 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01507 19 319 Lipid Metabolism Gene Families AT5G19980 26.498 3.90e-12 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01507 K15281 - gmx:100777622 537.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01507 10 28382145 28386133 Rops10g01507 10 28382145 28386133 ECH