Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01506 ATGGCTCCAAGATTGGATTTTTCCAATTGGTGGACCAAGGATACAGAAAAAGGAACACCAGTGGTAGTGAAAATGGAGAACCCCACTTTTTCTGTTGTGGAGATTAATGGTGCAGATGCTGCATTCAGGCCGGTAGAGAAAAGCCGTGGCAAGAATGCTAAACAAGTAACATGGGTTTTGCTTCTCAAGGCTCATCGTGCTGTTGGCTGTGTCACTTGGCTTGCCAGTGTTCTGTGGACTTTGCTTGGAGCCATTAAGAAGAGGTTGATTCATAGACAAGGAGTAGCTATGGAGAGTGAGAGTGACAAGTTGGAAAAAGGGAAGTTACTGTTAAGAGTTGTTAGAGTGTTCCTAGTGATTTCCTTGGCTGTTTTGGCTTTTGAGGTGGTTGCTTACCTTCAAGGTTGGCATTTTGGGAATCCCAAGTTGCACATTCCTCGTGCTTCGGATTTGGAAGGCTTGCTCCACATGACTTATGTTGCTTGGTTAAGGTTTCGTGCTGAGTACATTGCTCCACCTATTCAGGCACTTTCTAAGTTTTGTGTTGTTTTGTTTCTTATCCAATCAGTGGATCGTATGCTTCTTTGCTTGGGGTGCTTTTGGATAAAATACAGGAAGGTTAAGCCCAAGATTGACGGGGATCCTTTCAAGATTGATGATGTTGAAAGATCTGCATGCTATTATCCCATGGTTCTGGTTCAAATTCCAATGTGCAACGAGAGGGAGGTGTATGAGCAGTCTATTTCTGCAGTCTGCCAAATTGATTGGCCAAGGGATCGTTTACTGATTCAAGTACTTGACGATTCTGATGATGAGAGCATACAGTGGTTAATTAAGACAGAGGTTTCTAAGTGGAGCCAAAACGGAATAAACATAATCTATAGGCATCGTGTAATCAGGACTGGATATAAAGCTGGAAATCTTAATTCTGCAATGAGCTGTGACTATGTGAAAGACTATGAGTTCGTTGCAATTTTTGATGCAGACTTTCAACCAAATCCTGATTTTCTTAAGCAAACTGTACCACATTTTAAGGACAATCCTGAACTAGGTTTGGTCCAAGCTAGATGGTCTTTTGTGAACAAGGATGAGAATTTGTTGACTCGTCTCCAAAACATTAATTTATGCTTCCATTTTGAGGTAGAACAGCAGGTCAATGGGGTATTTCTCAATTTTTTTGGTTTTAATGGAACTGCTGGTGTTTGGAGAATCAAAGCCCTAGAAGAGTCCGGGGGCTGGCTGGAGAGGACAACTGTAGAAGATATGGACATTGCTGTCCGGGCTCATCTCAATGGTTGGAAATTTATCTTCCTTAATGATGTAAAGGTACTTTGTGAAGTTCCTGAGTCATATGAAGCTTATAGGAAGCAGCAACACCGTTGGCATTCAGGTCCCATGCAACTTTTTAGGTTGTGTCTTCCAGCAATTGTGAGATCTAAGGTCTCAGCATGGAAGAAAGCAAACTTGATACTGCTGTTTTTTCTGTTAAGGAAACTAATCCTTCCCTTTTACTCCTTCACCTTATTTTGCATAATTCTTCCCTTAACCATGTTTGTCCCAGAGGCAGAGCTTCCTTTATGGGTGATCTGCTATGTGCCTGTATTTATGTCATTCCTTAACATTCTTCCTGCCCCAAAATCTTTTCCTTTTATTGTTCCCTACCTCCTTTTTGAAAATACAATGTCTGTCACCAAATTCAATGCAATGGTATCTGGACTCTTCCAATTGGGGAGCTCTTATGAATGGGTTGTCACAAAGAAAGCTGGTAGGTCATCAGAGTCTGATTTACTGGCTGCTGCAGAAAGGGAAACTAAGTCAATAGAACAACAAAAGATCCATAGAGTAGCTTCTGACAGTGAACTTATTGAGTCACAGCAATTCAAGGAACACAAAGAAGCAGCTCCATCACCTGTTAAGAAAGCTAATAAGATATATAAGAAAGAGCTAACTTTGGCATTCCTCCTCCTTACAGCTTCAGTCAGAAGTCTGTTGTCTGCACAAGGAGTTCACTTCTACTTTCTGCTTTTCCAAGGGGTGACCTTTCTCCTTGTTGGCCTTGATTTGATTGGAGAGCAGATGAGCTAG 2085 0.4158 MAPRLDFSNWWTKDTEKGTPVVVKMENPTFSVVEINGADAAFRPVEKSRGKNAKQVTWVLLLKAHRAVGCVTWLASVLWTLLGAIKKRLIHRQGVAMESESDKLEKGKLLLRVVRVFLVISLAVLAFEVVAYLQGWHFGNPKLHIPRASDLEGLLHMTYVAWLRFRAEYIAPPIQALSKFCVVLFLIQSVDRMLLCLGCFWIKYRKVKPKIDGDPFKIDDVERSACYYPMVLVQIPMCNEREVYEQSISAVCQIDWPRDRLLIQVLDDSDDESIQWLIKTEVSKWSQNGINIIYRHRVIRTGYKAGNLNSAMSCDYVKDYEFVAIFDADFQPNPDFLKQTVPHFKDNPELGLVQARWSFVNKDENLLTRLQNINLCFHFEVEQQVNGVFLNFFGFNGTAGVWRIKALEESGGWLERTTVEDMDIAVRAHLNGWKFIFLNDVKVLCEVPESYEAYRKQQHRWHSGPMQLFRLCLPAIVRSKVSAWKKANLILLFFLLRKLILPFYSFTLFCIILPLTMFVPEAELPLWVICYVPVFMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAMVSGLFQLGSSYEWVVTKKAGRSSESDLLAAAERETKSIEQQKIHRVASDSELIESQQFKEHKEAAPSPVKKANKIYKKELTLAFLLLTASVRSLLSAQGVHFYFLLFQGVTFLLVGLDLIGEQMS* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01506 694 FunFam probable xyloglucan glycosyltransferase 5 222 447 - -
Rops10g01506 694 Pfam Glycosyl transferase family group 2 323 529 IPR001173 -
Rops10g01506 694 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 222 448 IPR029044 -
Rops10g01506 694 SUPERFAMILY Nucleotide-diphospho-sugar transferases 231 509 IPR029044 -
Rops10g01506 694 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 157 691 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01506 Rops-Chr10 28369759 28373260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01506 1 694 Miscellaneous Gene Families AT4G31590 78.448 0.0 1128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01506 - - gmx:100776577 1281.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01506 10 28369759 28373260 Rops10g01506 10 28369759 28373260 ECH