Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01476 ATGCCTCTAGGAGAAAGGGCAGGGGATAAGAGCGAATCTCGATACTGTGGCGTAGAAACAGAGTTCAACGATGACATGCCTCACGTCCTCGCTTTCAATCTCTCCTCTGGAGGCTTCGATTTCGTTATTGCTCCTCTGATGGATCCTTCTTATCGACCAAGCTTAGTGCAAAAGGATAGTTTGGGATCTGGTGCTCCGCCATTCGCAGGGTCAGACTTGGTCTTGAGCCCATCCCAATGGAGTAGTCATGTAGTGGGAAAAATTAGCTCTTGGATAGATTTGGATTCGGAGGATGAAACCCTTAGAATAGATTCTGAAACCACTCTCAAACAAGAAATAGCTTGGGCTTCTCATCTCTCTTTGCAGGCTTGCCTGCTTCCTGCCCCTAAAGGAACTTCTTGTGCTAATTATGCTAGGTGTGTGAATCAAATCTTACAGGGCTCGAGTAATATGCAGTTGTGGCTTAGGATTCCGTTGGTCAAGTCTGATGGTGACTCTATGGGTGCAAACTCTGATACTTTGGTTGACTCCTGGGAAATATGGAATTCTTTTCGTCTACTATGTGAGCATCATAGTCAACTGTCAGTTGCACTTGATATTCTGAGTACTCTGCCTTCGGCAAATTCGGTAGGACGTTGGTTTGGGGAGTCTGTTAGAGCAGCTATAGTAAATACTGATTCCTTTTTAACTAATGCTCGTGGATATCCATGCCTCTCCAAACGCCACCAGAGGTTAATTACTGGTTTTTTTAACCATTCTATACAGATCATTATATCTGGAAATTCAGTTCATCCGAAAGCAAGTGTGGATGCAATTGATTTTCATAATCATTCTGTTGAAGGTTCACAAAGGCATCCCTTGAGGTCATATCTGGACTACGTTGGATATCTATACCAAAAAATGGATCCTCTTCCTGAGCAAGAACGTTTTGAGCTTGGATACAGGGATTTTTTACAGTCACCCTTGCAACCTCTGATGGATAATTTAGAGGCTCAGACGTATGAGACTTTTGAGAAAGATGCAATGAAATACATTCAGTACCAAAGAGCAGTTAGTAAAGCATTGCTGGACAGGATTCCTGATGAAGATGCATCTGTCAAAACCACTGTATTGATGGTTGTTGGAGCAGGACGTGGGCCTCTTGTGCGGGCATCATTACAGGCTGCAGAAGAAACTGGGCGGAAGCTAAAAGTTTATGCTGTTGAAAAGAATCCAAATGCAGTTGTTACTCTTCATGCATTGATTAAGTTAGAGGGATGGGAGGATACTGTTACTATTGTTTCAAGTGACATGCGTTATTGGAATGCCCCTGAAAAAGCTGACATATTGGTTAGTGAATTGCTAGGTTCTTTTGGTGACAATGAACTGTCTCCTGAGTGCCTAGATGGAGCCCAGAGGTTTCTAAAGCCAGACGGAATTTCAATACCATCTTCGTACACAAGTTTCCTCCAACCAGTGTCCGCTTCAAAGTTATTTAATGATGTTAAGGCACATAAAGACCTTGTACACTTTGAGACTGCTTATGTTGTAAAAATACACAATGCAGCTCGACTTGCTCCATCTCAACCTGTTTTTACTTTTACTCATCCAAAACTCTCTGATAAAGAAAGCAATCAGCGCGATAAAAAGTTGCATTTCGTGATACCTAATGACACTGGGTCAGCTATGGTACATGGATTTGCTGGCTACTTTGATGCAACTCTTTACAAGGATGTGCATCTTGGAACTGAACCTTCAACAGCGACACCAAACATGTTCAGTTGGTTTGCAATATTTTTCCCACTAAGGACACCTATTTGCGTGAAACCGGGTTCCACACTTGAAGTACAATTCTGGCGCTGTTGTGGTCCTACAAAGGTTTGGTATGAATGGTGTGTCACATCTCCCTCGACGTCTCCTATTCACAACATTAATGGACGTTCATACTGGGTTGGGCTTTAG 1941 0.4276 MPLGERAGDKSESRYCGVETEFNDDMPHVLAFNLSSGGFDFVIAPLMDPSYRPSLVQKDSLGSGAPPFAGSDLVLSPSQWSSHVVGKISSWIDLDSEDETLRIDSETTLKQEIAWASHLSLQACLLPAPKGTSCANYARCVNQILQGSSNMQLWLRIPLVKSDGDSMGANSDTLVDSWEIWNSFRLLCEHHSQLSVALDILSTLPSANSVGRWFGESVRAAIVNTDSFLTNARGYPCLSKRHQRLITGFFNHSIQIIISGNSVHPKASVDAIDFHNHSVEGSQRHPLRSYLDYVGYLYQKMDPLPEQERFELGYRDFLQSPLQPLMDNLEAQTYETFEKDAMKYIQYQRAVSKALLDRIPDEDASVKTTVLMVVGAGRGPLVRASLQAAEETGRKLKVYAVEKNPNAVVTLHALIKLEGWEDTVTIVSSDMRYWNAPEKADILVSELLGSFGDNELSPECLDGAQRFLKPDGISIPSSYTSFLQPVSASKLFNDVKAHKDLVHFETAYVVKIHNAARLAPSQPVFTFTHPKLSDKESNQRDKKLHFVIPNDTGSAMVHGFAGYFDATLYKDVHLGTEPSTATPNMFSWFAIFFPLRTPICVKPGSTLEVQFWRCCGPTKVWYEWCVTSPSTSPIHNINGRSYWVGL* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01476 646 Gene3D - 14 307 - -
Rops10g01476 646 Pfam PRMT5 arginine-N-methyltransferase 306 475 IPR035075 -
Rops10g01476 646 FunFam Protein arginine N-methyltransferase 5 310 477 - -
Rops10g01476 646 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 5 7 646 IPR025799 GO:0016274|GO:0018216
Rops10g01476 646 Gene3D - 478 646 - -
Rops10g01476 646 Gene3D Vaccinia Virus protein VP39 310 477 IPR029063 -
Rops10g01476 646 PIRSF PRMT5 3 646 IPR007857 GO:0006479|GO:0008168|GO:0035246
Rops10g01476 646 FunFam Protein arginine N-methyltransferase 14 307 - -
Rops10g01476 646 Pfam PRMT5 TIM barrel domain 38 300 IPR035247 -
Rops10g01476 646 Pfam PRMT5 oligomerisation domain 478 644 IPR035248 -
Rops10g01476 646 FunFam Protein arginine N-methyltransferase 5 478 646 - -
Rops10g01476 646 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 333 645 IPR029063 -
Rops10g01476 646 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 318 624 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01476 Rops-Chr10 28073720 28084924 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01476 K02516 - gmx:100782245 1184.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01476 10 28073720 28084924 Rops10g01476 10 28073720 28084924 ECH