Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01464 ATGCTGAGGAAGAGGAGCAGGTCACACCAGAAGGATCAACACCACATGGGTCATCTGACAATTTCTGATGCTAATACTGATTACTATTCTCAATCTCATGCTTTGGGGCACAGCATCAAAGGTCACTCAATTTTCAAGGCCCCTTGTCTGTTTGTGGGTCTGGGTCCTAAAAGCTTATTGGATTCTGATTCAGTTAGGAGCCCCACTTCTCCACTAGATGCTAGAGTTCTTTCAAATCTAGGCAACCCTGTTAGAAACCCAAGATCATCATCCCATGAAGGGAACCAAAGGAGCTGGGATTGCTGCAAAGTGGGTTTAGGCATCATAGGATCTTTGGAAGATTGTTCTAGGTTTTCTGGAAAAATTTTCCCATCACCAAAGAGCAAGCAAATTAGTCTCAGTCCCCAAATGATTATCAAAACCCCAGATTATCAAACCTATATGGATTCTTTGGAGAAATCCAAGTCTTTGCCCAATGATTTTTGTAAGGTTCAAAACAGATCTGTTGTCCACCAAGGTGAATCCACTGTTTTTTTTGAGATTGGAGAAACTGGCCTAGAGCATGAACTATTTGGGAAAACCAGGTCCTGTTCATTGGATTCTTGCAGTCCATTGAAAGTCCTCTCTGGTTTCATTGCTTCCAACACTGATTCAGACATTGATAATTTTGCTTTGAAAGATATTATCATCCCAGTGAGCTCTCCTCCTCATTTTACTGGAGGAAGCCAGAACTCAAATACCATATTCACTTCCAATGATTTGTTGAAGTCTCTATCAGCTAGTGAGATTGAACTCTCTGAGGACTACACATGTGTGATCTCCCATGGCCCCAATCCCAAAACAACTCATATTTTTGGTGATTGCATCTTGGAGACTCATCCTAGTGCACTCAACAACTACTTCAAGAATGAAGAGAAGGAGAAGGGAGTGATCCTGAACAAGTACCCCTCAAGTGACTTCTTAAGTTTCTGCCACCGTTGCAACAAGAAACTGAAAAAGAATGAAGATATTTATATTTACGGAGGTGAAAAAGCTTTTTGCAGTTTAGATTGCCGTGAAATGGAGATTATGATTGATGAGAAAAAAGAGAAATCCAACCCTCCTTCTAAAAACTCTCCAAAGCCAAAATTTGGTGAGAAAATTTTTGAAACAGGCATCCCTACAGCAACATAA 1173 0.4066 MLRKRSRSHQKDQHHMGHLTISDANTDYYSQSHALGHSIKGHSIFKAPCLFVGLGPKSLLDSDSVRSPTSPLDARVLSNLGNPVRNPRSSSHEGNQRSWDCCKVGLGIIGSLEDCSRFSGKIFPSPKSKQISLSPQMIIKTPDYQTYMDSLEKSKSLPNDFCKVQNRSVVHQGESTVFFEIGETGLEHELFGKTRSCSLDSCSPLKVLSGFIASNTDSDIDNFALKDIIIPVSSPPHFTGGSQNSNTIFTSNDLLKSLSASEIELSEDYTCVISHGPNPKTTHIFGDCILETHPSALNNYFKNEEKEKGVILNKYPSSDFLSFCHRCNKKLKKNEDIYIYGGEKAFCSLDCREMEIMIDEKKEKSNPPSKNSPKPKFGEKIFETGIPTAT* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01464 390 MobiDBLite consensus disorder prediction 62 96 - -
Rops10g01464 390 PANTHER FCS-LIKE ZINC FINGER 11 1 389 IPR044585 -
Rops10g01464 390 Pfam zinc-finger of the FCS-type, C2-C2 314 362 IPR007650 -
Rops10g01464 390 MobiDBLite consensus disorder prediction 360 390 - -
Rops10g01464 390 ProSiteProfiles Zinc finger FLZ-type profile. 319 363 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01464 Rops-Chr10 27914124 27916357 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01464 - - gmx:100779553 520.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01464 10 27914124 27916357 Rops10g01464 10 27914124 27916357 ECH
Rops9g01844 9 33262843 33265381 Rops10g01464 10 27914124 27916357 PCT