Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01453 ATGCAGATGGCTCAGTTGGACCCAACTCTGAACGGGGTTGATTCATCAGGGAGACAGATGGAAATGGGACTCATGGGTCCTGTATCCACTGCTCCTATGTCACAGCATCAGGGAGCATCGAATGATCATGTTGGATCGTTAAGAGCCGTGCCTGTTGAACCCAGGTCTCAAGGCTCACCCCTTTCAACCGTGCAGGGTGGGCGGGTAGAAGCCCGAGCAAGTAATCCGGGAATGCATCAGTTTGTTTTACCTAACAAACAATCCGTGCAAACGGGGACAACGCCGAAGCACATGGGGCCACATCAACTGCCAACAACTCCCAAGCGGAAGGCATCGATGGAACTGTCGTCTGGTAGCTCCATGACGTCTAGCAAGCGGGTTGCACAAGTGGGAAATAGACCTTGGTTGCAGCAAGCATCCAATGCATCAAATAGAGGTTCTCCGCAGATGCAGTCCCAGTCAAATGCTTCCAGGCCACAGCATTTGGCGGCATCTGGTAAGAGAAAAACACAGATGGATTCCACTTCCAGTAAATCTGGGACACCTCGGTCTTCGAATGCTAAAAGTCAGAATACACAGGTGAAACAATCCCCCAAGGTTCAAACTGAATCATCTGAAAGTGTTAGGGCCAAGATGAGAGAGTCGTTAGCTGCTGCACTGGCCTTGGTTTCTCAGCAAGATAAACCTCTAGTCTCAAACAATAATACAGTGAATGATGCTGCCAATACTCAGGGTAAACTAGAGAACAGCTCTCAGTGTGCAGTTTCAGCATCTGCATCCACTGATACTGCTCTGGAGCAAAGGCAGGAAATTTCTCAATCTGTTAATTCCTCTTTTGCTGGAGCTGATTCAGTTGACCATGCAATGGGAGAGCACAGAAAGAGTACAGCATCTAATGAAGATTTTTCTGAAAAATGTAAGGACTATGAGGCAGGATCCACAACTGTATCAAACAATGAAAATATACCGAGTTCTATGCAAGTCTTGAACTGTGATAAGCAAGACTTCCAGACTAGTTACATTTTGACTACTGATGATGTTCCTTTCAGTGACGGTTTCTTTATGAAAGATGAACTTTTGCAGGGAAATGGTCTTTCCTGGGTATTATCTGATATGATGGACATAGAAAATCAAAGGGAAAGTCAAACTAATGTAGAGCAGAGATCGGAACCTGAGGAAACAGGTGGGGTTGGTAGGGAGGCAGTCCCTTTACCCGAAATTTTAGCATCAAGGATAGAAGCAGAACTCTTCAAACTATTTGGAGGTGTGAACAAAAAGTACAAAGAGAAGGGGAGGTCTCTTTTATTCAATTTGAAAGATCGCAATAATCCTGAACTGAGAGAAAGGGTTATGTTTGGTGAAATTCCCCCAGAACAATTATGTTCCATGACTGCAGAGGAACTTGCATCAAAGGAGCTTACTCAGTGGCGACAAGCCAAGGCTCAGGAGCTTGCTCAAATGGTGGTTTTACCTTCAGATGGTGATATTAGACGTTTGGTCAAAAAAACACATAAAGGTGAATTTCAAGTGGAAGTTGAACACGAAGACAATGTCTCGGCGGAAGAGTTTTCAGGTGGCACAAACTCAGTTGCTCGAAGCCAAACAATTAAAAAAGATGTGGAAGCCACTTCTCCTTCCAAACCTGACGTGATCAAAGGTGATTGGAACACTGGTGGTGATAAGAGAAATTTACAGAAGGATAATCCATTTTCCATTACCATTCCTTCCAATGATGGGACTGATCCCATGCAAGGGCTTATGACAGATGATGCATTGAAGGACCCTGACTTTCTTCCACCAATTGTCTCTCTTGATGAATTCATGGAATCCCTTCATTCTGAGCCACCATTTGAAAATTTACCAGTAGAATCTGGAAAAGTGACACCTATCTCAAACAAGGATGATTCTGAGGTTGGATCTAAATCAAAATCTTCTGATTTAACGCCAAGTGAGCAAGCTGATGTCGCCCCTGAGAAGACTGAGAAGTTTCAAAGCACAGGTGTAAATTCAGATGCTGAACAGGAAAAAAGGGTTAACGAATCCGGTGCCATTTCTTCTGATACAAGATATGGTGAGAGTCAAGCTGACACGAAGATGACTGATGGTCATACCAAGGAAAGGTCAGCTGATGACTTGAAGACTGCTTCCAGTGATGCTGAGTTGAGAGCCAGTCAGTTTCATGCCGAAGAGAGATATGGTAATAATAATATATATTCAAAAACTGCAGTCCCCACTAAGGGTGAATGCCTCTGGGAGGGAATGCTTCAACTGAACATCTCTACCACTCATTCAGTCATAAGCATCTTTAAAAGTGGTGAGAAAACTTCCATGAAAGACTGGCCGGGGTTTATTGATATCAAGGGAAGAGTACGACTTGAGGCATTCGAGAAATTTCTACAAGAGCTTCCAATGTCAAGAACTCGAGGGATCATGGTTTCGCATTTTGTTTCCAAAGGGTCTTTCCCCGACGAGCAATCAACTCTCCGTGAGGTAGCTGACTCGTACATCTTGGACGAGAGAGTGGGATTTGCCGAACCTGTGCAAGGAGTTGAACTTTACTTTTGCCCACCTCATAAGAAAACAGCTGAAATGCTCAGCAAGATACTTCCAAAGGAACAAATTGAGGCAGTTAATTCTATTGATAATGGCCTAATTGGTATTATTGTATGGAGAAGAACTAATTTAACTTCATCTATATCACCCACTACTTCTTCTCACCACAAACATGGTTCTAAAAGACAATACTTCACTAGGAGACAGCAAGATACAAATGTAAATGCCAATTCCAACCACAAAGCAGTACCCTCTACGGGCATTAACACCACAGAGACTGGACCCCAATGTGATGACGATGATGATATTCCTCCTGGATTTGGGCCTGCAGTGGCCCGAGTCGAGGATGACCTCCCGGAGTTCAATTTCTCTGGAAGTTCAAACCCATCATCGCTCTTGGTTCAAAAACCAATGGGACCAGGTATGGTCCCATTTCATTCGGTTAACCAAGCCCCATCGCGTCCTGTGGAACAAATGAGGGAACTTGTACACAAATATGGGCAAAATAAAACAACTGTACCTCCAGTAAACTGGCAGGATAAATTTGGGGGTACAATTCAACCCTGGAATGATGATGATGATGACATACCTGAATGGCAGCCTCAAACCTCCCAGAACCAGTTTCCTCCCCGACAACCAATGCCAAACTTCCACATTCGACCTCACATCACAAATCAACCATTGGCGGGTTCACCAAATCAGTCAATGATGACCACACAATATCTGCAACCCCCTATGAATGTAACACATGGCCAACGAAATTTCGGACCTCAGTGGGTGCCTTCTACCCAGCCAAGCGGTGGACAGCCATATGGAGTGCCTCCTCAGGGCACTACCTGGTCTCAGCATGTTCCCAGAAGTAGGGGATTTTAG 3426 0.4457 MQMAQLDPTLNGVDSSGRQMEMGLMGPVSTAPMSQHQGASNDHVGSLRAVPVEPRSQGSPLSTVQGGRVEARASNPGMHQFVLPNKQSVQTGTTPKHMGPHQLPTTPKRKASMELSSGSSMTSSKRVAQVGNRPWLQQASNASNRGSPQMQSQSNASRPQHLAASGKRKTQMDSTSSKSGTPRSSNAKSQNTQVKQSPKVQTESSESVRAKMRESLAAALALVSQQDKPLVSNNNTVNDAANTQGKLENSSQCAVSASASTDTALEQRQEISQSVNSSFAGADSVDHAMGEHRKSTASNEDFSEKCKDYEAGSTTVSNNENIPSSMQVLNCDKQDFQTSYILTTDDVPFSDGFFMKDELLQGNGLSWVLSDMMDIENQRESQTNVEQRSEPEETGGVGREAVPLPEILASRIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELRERVMFGEIPPEQLCSMTAEELASKELTQWRQAKAQELAQMVVLPSDGDIRRLVKKTHKGEFQVEVEHEDNVSAEEFSGGTNSVARSQTIKKDVEATSPSKPDVIKGDWNTGGDKRNLQKDNPFSITIPSNDGTDPMQGLMTDDALKDPDFLPPIVSLDEFMESLHSEPPFENLPVESGKVTPISNKDDSEVGSKSKSSDLTPSEQADVAPEKTEKFQSTGVNSDAEQEKRVNESGAISSDTRYGESQADTKMTDGHTKERSADDLKTASSDAELRASQFHAEERYGNNNIYSKTAVPTKGECLWEGMLQLNISTTHSVISIFKSGEKTSMKDWPGFIDIKGRVRLEAFEKFLQELPMSRTRGIMVSHFVSKGSFPDEQSTLREVADSYILDERVGFAEPVQGVELYFCPPHKKTAEMLSKILPKEQIEAVNSIDNGLIGIIVWRRTNLTSSISPTTSSHHKHGSKRQYFTRRQQDTNVNANSNHKAVPSTGINTTETGPQCDDDDDIPPGFGPAVARVEDDLPEFNFSGSSNPSSLLVQKPMGPGMVPFHSVNQAPSRPVEQMRELVHKYGQNKTTVPPVNWQDKFGGTIQPWNDDDDDIPEWQPQTSQNQFPPRQPMPNFHIRPHITNQPLAGSPNQSMMTTQYLQPPMNVTHGQRNFGPQWVPSTQPSGGQPYGVPPQGTTWSQHVPRSRGF* 1142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01453 1141 PANTHER TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEIN 114 977 - -
Rops10g01453 1141 MobiDBLite consensus disorder prediction 519 594 - -
Rops10g01453 1141 MobiDBLite consensus disorder prediction 89 211 - -
Rops10g01453 1141 ProSiteProfiles TFIIS central domain profile. 374 496 IPR003618 GO:0006351
Rops10g01453 1141 MobiDBLite consensus disorder prediction 924 956 - -
Rops10g01453 1141 MobiDBLite consensus disorder prediction 230 249 - -
Rops10g01453 1141 SMART mid_6 376 479 IPR003618 GO:0006351
Rops10g01453 1141 Gene3D - 377 471 IPR036575 GO:0006351
Rops10g01453 1141 MobiDBLite consensus disorder prediction 378 398 - -
Rops10g01453 1141 MobiDBLite consensus disorder prediction 521 541 - -
Rops10g01453 1141 Pfam Transcription factor S-II (TFIIS), central domain 400 485 IPR003618 GO:0006351
Rops10g01453 1141 MobiDBLite consensus disorder prediction 1 24 - -
Rops10g01453 1141 Pfam SPOC domain 746 890 IPR012921 -
Rops10g01453 1141 MobiDBLite consensus disorder prediction 381 395 - -
Rops10g01453 1141 MobiDBLite consensus disorder prediction 167 205 - -
Rops10g01453 1141 MobiDBLite consensus disorder prediction 109 161 - -
Rops10g01453 1141 MobiDBLite consensus disorder prediction 924 945 - -
Rops10g01453 1141 MobiDBLite consensus disorder prediction 562 583 - -
Rops10g01453 1141 MobiDBLite consensus disorder prediction 614 719 - -
Rops10g01453 1141 MobiDBLite consensus disorder prediction 1 16 - -
Rops10g01453 1141 SUPERFAMILY Elongation factor TFIIS domain 2 405 472 IPR036575 GO:0006351
Rops10g01453 1141 MobiDBLite consensus disorder prediction 694 719 - -
Rops10g01453 1141 CDD SPOC_TFIIS 750 890 - -
Rops10g01453 1141 MobiDBLite consensus disorder prediction 1110 1141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01453 Rops-Chr10 27770156 27776146 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01453 - - gmx:100808809 1675.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01453 10 27770156 27776146 Rops10g01453 10 27770156 27776146 ECH