Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01446 ATGGCTGGTCTCTCTGAAGCCTACAGAGAACACCCTCTCCACCTCCCTCATATTATCCCTTTGGACTTTTCTTCAGTTCAAAGCTTACCTGAATCCCACACATGGTCTCTATCTAATGATGATTATTCCTCATTCAATGGATATCCAGATGGCGATGGATCATCTATACCCACCATTGATCTCAAGGATCCTAATGCCATGAAACTAATAAGCCTTGCATGTGAGCAATGGGGTGCTTTCCAATTGAAGAATCATGGTGTATCATTTAGTGTTATTGAAGAGGTTGAAAACGAGGCCAAGCGCCTCTTTGCTCTCCCCACCGAGCAGAAGTTGAAGGCCCTGAGACCCCCCAGCGGCACCACCGGATATGGCAGGGCTCGGATATCACCATTCTTCCCCAGGTTCATGTGGCATGAAGGATTTACCATCATGGGTTCTCCATATGATGATGCCAAAAAGTTATGGCCTAATGACTATGCACGGTTTTGTGATTTGATGGAGAAATATGAGAAGCAAATGAAGGGTCTAGCGGAGCAACTAACACGCATGATGTTAGAGTTATTGGACACTAGTGAGGAAAAAAAGAAGTGGGTTGGTTCAAGCAACATGTGTGGAGCGGTTCAGCTGAATTTCTACCCAAAATGTCCTGAACCGAACCGAGCCATGGGTCTAGCCCCTCACAGGGACACATCTCTTTTCACAATCCTCCATCAAAGCCAAACCAAGGGCCTCCAAATCTTCAAGGAAGGTAAAGGGTGGGTTCCTGTGCACCCACACCCTAACCTTCTAGTTGTTAACATTGGCGACCTATTGCATATCATATCCAACACAAGGTTCCGCTCTGCACTTCACCGTGTGACTGTGAATAAGACCCACCAACGTTACTCTGTGGCCTATTTTTATTGTCCACCACCAGATTTTGTGCTTTCTCCTTTGGTCAATAGGGATCCCAATGCTGCTCGTTTTCGTGATGTGACTGTGAAGGAGTATATTGGGATTAAAGCCAAGAATCTTGGGGCAGCACTGTCTTTGATTAGTACTTGA 1044 0.4588 MAGLSEAYREHPLHLPHIIPLDFSSVQSLPESHTWSLSNDDYSSFNGYPDGDGSSIPTIDLKDPNAMKLISLACEQWGAFQLKNHGVSFSVIEEVENEAKRLFALPTEQKLKALRPPSGTTGYGRARISPFFPRFMWHEGFTIMGSPYDDAKKLWPNDYARFCDLMEKYEKQMKGLAEQLTRMMLELLDTSEEKKKWVGSSNMCGAVQLNFYPKCPEPNRAMGLAPHRDTSLFTILHQSQTKGLQIFKEGKGWVPVHPHPNLLVVNIGDLLHIISNTRFRSALHRVTVNKTHQRYSVAYFYCPPPDFVLSPLVNRDPNAARFRDVTVKEYIGIKAKNLGAALSLIST* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01446 347 Coils Coil 159 186 - -
Rops10g01446 347 FunFam Gibberellin 3-beta-dioxygenase 1 17 333 - -
Rops10g01446 347 SUPERFAMILY Clavaminate synthase-like 16 338 - -
Rops10g01446 347 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 200 303 IPR005123 -
Rops10g01446 347 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 56 330 - -
Rops10g01446 347 Pfam non-haem dioxygenase in morphine synthesis N-terminal 56 156 IPR026992 -
Rops10g01446 347 Pfam 2OG-Fe(II) oxygenase superfamily 207 303 IPR044861 -
Rops10g01446 347 Gene3D - 20 338 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01446 Rops-Chr10 27685580 27687506 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01446 56 330 Glycosyltransferase AT5G59530 30.612 1.16e-32 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01446 K04124 - gmx:100818754 526.168