Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01444 ATGGGTAGTGAGAGTGAGAAGATCCCATGTTTGGATTTTAGGAGGAATGGGGTGGCATTAGAAGAAGGGAGTGAGTGGTGGAAAGAGATGAGCAAGAAAATAAGAGAAGCATGTGAGAGTCATGGTTGCTTTCTCTTAATGTGTGATGAGATACCAAGGGATGTACATGAAGAAATGTTCAAGGGCATTAAGGCATTGTTTGATCTTCCTGAAGAAACCAAGCAGAAACACGTTAGCCCAAAGCCATATAGGAGCTTCCAAAGCAAAATCCCTGTGATTCCCCTCTGTGAAAGCTTTGGAATTGATGATGCTCCTCTCCCAGCTATAGCTCAGGCCTTCACAAATCTCATGTGGCCTCAAGGAAACCCATCTTTCTGTGAGACACTGAAGTCCATGAGCTCAAAGATCCTAGAACTGTGTTTCCTCATATTGAAGATGATTATGGAAAGTTATGGCCTTCCGAAGCATTACATTTCGGATGTTGAAAACCTGAAGAGCTCTAGCAATTCACGGTTGATGAAGTACAAAGTTCCTGAAAACAGCAATGGCTCCGAGATTGGCCTGGTAGCTCACACCGACAAAAACACCTTAACCATTCTATGTCAAAATGAAGTTAAGGGTCTCCAGGTGCTAACCAAAACAGGCAAATGGATTGAACCAAAGATACCCCAGGATGGCTATATGGTCATTGTTGGTGACATACTCAAGGCGTGGAGCAATGGAAGACTTCATGCAGCCGCGCACAGAGTGATAATGAGGGGAGATAAAGAAAGGTACTCATTTGGGCTTTTTGCAGTGCCAAAGGAAGAGGTGGTAATTGAGGTGCCCCATGAGCTGGTGGAAGACAAAGTCCATCCTCTCCGATACAAGCCATTCAAGTATGGGGAGTACTTCTATTACCATGTTTCAACTCTCAAAGAAAATGCACTTGAAGCATTTGCAGGTCTTTGA 951 0.4395 MGSESEKIPCLDFRRNGVALEEGSEWWKEMSKKIREACESHGCFLLMCDEIPRDVHEEMFKGIKALFDLPEETKQKHVSPKPYRSFQSKIPVIPLCESFGIDDAPLPAIAQAFTNLMWPQGNPSFCETLKSMSSKILELCFLILKMIMESYGLPKHYISDVENLKSSSNSRLMKYKVPENSNGSEIGLVAHTDKNTLTILCQNEVKGLQVLTKTGKWIEPKIPQDGYMVIVGDILKAWSNGRLHAAAHRVIMRGDKERYSFGLFAVPKEEVVIEVPHELVEDKVHPLRYKPFKYGEYFYYHVSTLKENALEAFAGL* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01444 316 Gene3D - 5 314 IPR027443 -
Rops10g01444 316 Pfam non-haem dioxygenase in morphine synthesis N-terminal 8 87 IPR026992 -
Rops10g01444 316 SUPERFAMILY Clavaminate synthase-like 4 304 - -
Rops10g01444 316 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 167 267 IPR005123 -
Rops10g01444 316 Pfam 2OG-Fe(II) oxygenase superfamily 178 264 IPR044861 -
Rops10g01444 316 FunFam 2-oxoglutarate-dependent dioxygenase DAO 6 315 - -
Rops10g01444 316 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 8 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01444 Rops-Chr10 27655563 27658414 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01444 7 297 Glycosyltransferase AT5G59530 23.779 3.67e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01444 - - gmx:100817159 469.544