Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01432 ATGCTGAACACACCATCAGCAATGTCCAAGCCTCATCTTTCTTTCCGATGCTCAATCCTTTGGAGTCTCGTCCTCCCAACACTGTTCATCAATTACTCTCGAGCTGACGTTGGAACTGCTGCCCATTATGGCCCTCCCTTTTTACCCACCGAATGTTTTGGGAGTGACGCATCACAGTTCCCATCGAGCAACATGTTTGGTTCAGCTGGGGAAGGTATATGGGACAATGGTGCAGCATGTGGGAGACAGTATCAGGTGAGGTGCATCAGTGCAGCTGTTCCTAGAACTTGTATTCCTGGTCAGATCATTCAGATTAAGATTGTTGATCGAGCACAATCCTCTGTTTCTAGGCCTTCTGCAAGTGAAACATCCCTTGTTCTCTCCACCACTGCATTCGGGGTCATCTCTAATGCTTCTGCTTCCTTGATTAACATTGAATTCCAGCAGGTTTGA 453 0.4724 MLNTPSAMSKPHLSFRCSILWSLVLPTLFINYSRADVGTAAHYGPPFLPTECFGSDASQFPSSNMFGSAGEGIWDNGAACGRQYQVRCISAAVPRTCIPGQIIQIKIVDRAQSSVSRPSASETSLVLSTTAFGVISNASASLINIEFQQV* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01432 150 CDD DPBB_EG45-like 36 148 - -
Rops10g01432 150 SUPERFAMILY Barwin-like endoglucanases 24 150 IPR036908 -
Rops10g01432 150 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 17 149 - -
Rops10g01432 150 Gene3D - 34 150 IPR036908 -
Rops10g01432 150 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 38 150 IPR007112 -
Rops10g01432 150 Pfam Lytic transglycolase 73 146 IPR009009 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01432 - - lja:Lj1g3v1914930.1 227.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01432 10 27439382 27443172 Rops10g01432 10 27439382 27443172 ECH