Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01421 ATGAGCTACAGCAGCTCCTCAATGAGTTCTGGCAGTGGAACTGCTAGAAGGACACTTGAGTTTGGAAGGACCCATGTTGTTAGACCTAAAGGGAAGCACCAGGCAACTATAGTTTGGCTACATGGTCTTGGTGATAATGGCTCAAGCTGGTCCCAACTCTTGGAAACTCTTCCTCTTCCAAATATTAAATGGATTTGCCCGACTGCTCCTACGCGGCCCGTAGCCTTATTTGGTGGATTTCCTTGCACTGCTTGGTTTGATGTTGAGACGATTTCAGAAGATGCTCTTAATGATTTGGAGGGTTTAGATGCTTCTGCAGCACACGTTGCCAATCTTTTGTCAACAGAGCCTCCAAATATCAAACTTGGTATTGGGGGCTTCAGTATGGGTGCTGCTACTGCACTTCACTCAGCTACATGCCATGTTCTGGGGCACTATGGGAATGGAAACATTTACCCTATCAACTTAAGTGCAGTTGTTTCTTTAAGTGGCTGGCTTCCTTGTTCAAGGACCTTGAAAAACAAGATTGAAGGATCCCGTGATGGCCTAAGGCGGGCAGCATCATTGCCCTTATTTCTCTGCCATGGAAATGGTGATGATGTGGTTGCATATGAATATGGAGAGAAATCTGCAAGGACCTTAAGCACAGCTGGATTCCAGAATCTGATATTTAGGAGCTACAATGGGTTGGGTCACTATACAGTCCCTGAAGAGACTGATGAAGTATGCAGGTGGCTAACTGCAAATTTGGGACTTGAGGGGCTTCGGTTGAACTGA 777 0.4595 MSYSSSSMSSGSGTARRTLEFGRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLETLPLPNIKWICPTAPTRPVALFGGFPCTAWFDVETISEDALNDLEGLDASAAHVANLLSTEPPNIKLGIGGFSMGAATALHSATCHVLGHYGNGNIYPINLSAVVSLSGWLPCSRTLKNKIEGSRDGLRRAASLPLFLCHGNGDDVVAYEYGEKSARTLSTAGFQNLIFRSYNGLGHYTVPEETDEVCRWLTANLGLEGLRLN* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01421 258 Gene3D alpha/beta hydrolase 14 251 IPR029058 -
Rops10g01421 258 Pfam Phospholipase/Carboxylesterase 25 247 IPR003140 GO:0016787
Rops10g01421 258 SUPERFAMILY alpha/beta-Hydrolases 25 249 IPR029058 -
Rops10g01421 258 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01421 Rops-Chr10 27319378 27324966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01421 1 254 Acyl Lipid Metabolism Gene Families AT5G20060 66.929 3.14e-130 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01421 K06130 - gmx:100811642 485.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01421 10 27319378 27324966 Rops10g01421 10 27319378 27324966 ECH