Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01396 ATGTCTCTGAAAGCGTCGTATTCATCGGAGAATCTGATGCTTCCGGTGTCGGATCCTCCGAACGACGAAGACCGAGAGTGGCTTTTGAAGGGCGATGATAATAAGATCTTCAGAGGTTCCACCATTGGAGGACGAAGTGCCTACGCTGCTATCTCTTACATGTCATGCGCAGTTCTCTTGGTGATGTTCAATAAGGCGGCTCTTTCATCTTATCACTTCCCATCTGCAAATGTCGTCACACTTCTTCAGATGGTATCTTCGTGTTGTTTTCTCTATTTATTGAGGTGCAGGAGGATAATTTCTTTCACAGCAGGTGAATCAGTAATTATTGATGATAACTCGAAAAAATTTGTGCCACTGAAGACTTTGAAGCACACTCTTCCTCTGGCAGGAGCATATTTACTTTATATGCTAGTCACCATGGAGTCTGTTCGTGGAGTAAATGTTCCGATGTATACCACCCTTAGGAGGACCACCGTGGTATTCACAATGGTTGTAGAGTATATGCTGGTGGGGCAGAGTGTTGGCTTGATTGTCTTTGGCGCATTTATTGCGGGAGTGCGGGACTTCTCTTTTGATGCCCATGGTTATGCTGTCGTTTTCCTGTCAAACATCACCACGGCTATATATCTGGCAACCATATCCCGTGTTGGTTGTATTTGCAAAACTAGTGGCCTTAATAGCTTTGGTCTTATGTGGTGCAATGGTATCATATGTGGGCCACTTTTGCTTATTTGGACATTCGTTGGGGGTGACTTGAAGATGACAATCAATTTTCCTCAACTGCTTTCACCCGGTTTTATGGTTGTTTTGCTTTGTTCCTGCATCCTCGCTTTCTTCCTCAATTACAGTATTTTTCTGAACACAACTCTGAATTCAGCTCTGACACAGACAATTTGTGGTAATCTGAAGGATTTTTTTACTATTGGCTTTGGCTGGATAATTTTTGGTGGTCTACCATTTGATTTTTGGAATGTAATAGGACAACTTCTCGGTTTTGCGGGCTCTGGTTTATATGCCTACTGTAAGCTGGTTGGCAAATAA 1044 0.4291 MSLKASYSSENLMLPVSDPPNDEDREWLLKGDDNKIFRGSTIGGRSAYAAISYMSCAVLLVMFNKAALSSYHFPSANVVTLLQMVSSCCFLYLLRCRRIISFTAGESVIIDDNSKKFVPLKTLKHTLPLAGAYLLYMLVTMESVRGVNVPMYTTLRRTTVVFTMVVEYMLVGQSVGLIVFGAFIAGVRDFSFDAHGYAVVFLSNITTAIYLATISRVGCICKTSGLNSFGLMWCNGIICGPLLLIWTFVGGDLKMTINFPQLLSPGFMVVLLCSCILAFFLNYSIFLNTTLNSALTQTICGNLKDFFTIGFGWIIFGGLPFDFWNVIGQLLGFAGSGLYAYCKLVGK* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01396 347 PANTHER SOLUTE CARRIER FAMILY 35 47 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01396 Rops-Chr10 26932381 26936490 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01396 18 284 Organic Solute Cotransporters AT2G13650 25.267 4.91e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01396 K15281 - gmx:100778544 576.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01396 10 26932381 26936490 Rops10g01396 10 26932381 26936490 ECH
Rops9g01911 9 34872034 34880434 Rops10g01396 10 26932381 26936490 PCT