Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01392 ATGCAGAGACGAAGTCCTCCAAAGCACAGGCACGATGGGACTTCGCCGCTGCCTCTTGGCATGGATTGGAGTCCTGCACCACGAAAATGGAATGGGCGAGGTACAGTTTGGCCACACAATCATCGTACCGGTTGGAGTTATTGTGTCACAATACCTTCTTGGGTTTTCATTCCAAAATCAAGGAATTCAGATCCTATAGTGTTCTACAGGCTTCAAGTTGGTGTACAGTCACCGGAAGGGATTACAAAGCTCCATGGAGTACTTAGAAGATTCAATGATTTTCTAAAGTTGTTTGCTGATCTTAAAAAGGAGTTTCCCAGGAAAAATATCCCTCCAGCACCGCCCAAGGGACTCATGCGATTGAAAAGCCGAGCTTTATTGGAAGAGAGAAGGTGCTCTTTGGAGGAGTGGATCACCAAACTATTGTCTGACATTGATATATCAAGATGTGCTGCAGTGGCATCATTTCTTGAGCTAGAAGCTGCTGCTAGATCTTCATTCCAAGATGCAACCCAGCAGAATTCAGAAACAGATCCTGATTCCAATAACAGAGTTTATTCAGTGCAATCACCTCTCCATTCGAGCTTATCATTGATTGCTGGCAGTTCATCTGTTGCCTCAGATTATGGAAGTGATACTGCATATGAGCCATCTGAACTAGGAACTCCAAGAATTGGACGGGACGATAATTCTGAAGTTGGCACAGATGATCTAATGTTAGATGAAGATACAACAAATCCAATAGAAAAGCTTGTGAAATATGGCATATCAAATATTGATGAGGGTTTATTTATGGGTCAGACTATTCTAGAGCAATTGGAAGGCCTTCCTAGGCATAAAGTAAATGCCAGACATGTGAACTATGCTACAGAAAAGGACAAAAATAATGGTAATTCATATGATTCTTCACTTTTAGCTAATAATAGCATGGAGCTTTTCTCTGAGCCTGGGCATGCTAAGGTTATTGGTCACATTCGTAAGCTTTCAAATGAGAGTGCTGGAAGTGATGGGAGCTCGATACGAGGTAGTGACGTGTCCAATTTTGGGCTTCCAAATTCATCTGGTGATGGCTCTCTTGACCTTCCTGGATGTGCTTTGGCTTCAAGAGAAACAGATATCACGGGCCACACAAAGTTGAGATGTACTGGTGATGCTCAATTGGTCCTTCCACTAGATCAACGCAATAAATTGAACAGGAATCTTTCAACCATGCAGCGAAGGCTAGTCACTGCAAAAACTGATATGGAGGACCTTATAGTTAGATTGAATCAAGAAATAGCTGCAAAGGATTTTCTCGCAACAAAGGTGAAGGATTTGGAAGTAGAACTTGAAACTACAAAACAGAAAAATAAGGAGAACTTGCAGCAGGCTCTTCTGATTGAGAGGGAAAGGTTTACCCAAATGCAGTGGGATATGGAGGAACTTCGACGAAAGTCACTGGAAATGGAGATGAAACTAAAGTCTGAATTGGATGGAAATTCTAGTCAGGATTTGATGAAGGGATCAATTGTTCAGCAGAATGATGTGCTGTTGCAGAATTTAGATGCTACTAAAGAGCAGCTGGAAATTTTGTCAAAACAGTATGGAGAGCTAGAAGCAAAATCCAAAGCAGATGTTAAAATTCTGGTTAAAGAGGTCAAATCTCTTCGTAATTCCCAAACAGAGTTGAAGAAGCAACTTAGTGAGTCGATAAAGGAAAAGTGTGAAGCTGAGAACCTACGACTCCATGAAAGAGAGAAGAGGGAACAAGCAGAAACTGCTTGGAGAAAACTGCTGGAGAAATGCAGGCTTCTTTTTAACCAGCTCCAAGAGTGCAATGTCAATCTTCCAAATGAAGATGAAGATAGGACAGTCATGAATTCATCATCATTAACTGATGCTTTTAATCAATTAACAACATCCGATGACCAAATTGACATCCTACTAGCAGAGGTAGAAAACTTAGAGAAGGACTACGGAAGTGCAGCTTCCAATGTAGATAAAACCAATGACATAAAAGATGGTGTAATCTGTGATGATGAACTGAGAAAGATCATAGCAGATTTGTTCATCGATAATGTTAGATTGAGAAAACAGACAAAACGCGTTGCAAGGCATGCTCTCAAATTGGACATGACAGCAAGTGATGATTCTCCTTCAATGGAAACTGTAACAAGTATTTAG 2163 0.4092 MQRRSPPKHRHDGTSPLPLGMDWSPAPRKWNGRGTVWPHNHRTGWSYCVTIPSWVFIPKSRNSDPIVFYRLQVGVQSPEGITKLHGVLRRFNDFLKLFADLKKEFPRKNIPPAPPKGLMRLKSRALLEERRCSLEEWITKLLSDIDISRCAAVASFLELEAAARSSFQDATQQNSETDPDSNNRVYSVQSPLHSSLSLIAGSSSVASDYGSDTAYEPSELGTPRIGRDDNSEVGTDDLMLDEDTTNPIEKLVKYGISNIDEGLFMGQTILEQLEGLPRHKVNARHVNYATEKDKNNGNSYDSSLLANNSMELFSEPGHAKVIGHIRKLSNESAGSDGSSIRGSDVSNFGLPNSSGDGSLDLPGCALASRETDITGHTKLRCTGDAQLVLPLDQRNKLNRNLSTMQRRLVTAKTDMEDLIVRLNQEIAAKDFLATKVKDLEVELETTKQKNKENLQQALLIERERFTQMQWDMEELRRKSLEMEMKLKSELDGNSSQDLMKGSIVQQNDVLLQNLDATKEQLEILSKQYGELEAKSKADVKILVKEVKSLRNSQTELKKQLSESIKEKCEAENLRLHEREKREQAETAWRKLLEKCRLLFNQLQECNVNLPNEDEDRTVMNSSSLTDAFNQLTTSDDQIDILLAEVENLEKDYGSAASNVDKTNDIKDGVICDDELRKIIADLFIDNVRLRKQTKRVARHALKLDMTASDDSPSMETVTSI* 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01392 720 Pfam PX domain 87 158 IPR001683 GO:0035091
Rops10g01392 720 MobiDBLite consensus disorder prediction 208 240 - -
Rops10g01392 720 Coils Coil 631 658 - -
Rops10g01392 720 ProSiteProfiles PX domain profile. 47 164 IPR001683 GO:0035091
Rops10g01392 720 Coils Coil 539 585 - -
Rops10g01392 720 Coils Coil 429 456 - -
Rops10g01392 720 SUPERFAMILY PX domain 40 160 IPR036871 GO:0035091
Rops10g01392 720 Coils Coil 394 414 - -
Rops10g01392 720 Gene3D - 47 185 IPR036871 GO:0035091
Rops10g01392 720 MobiDBLite consensus disorder prediction 1 24 - -
Rops10g01392 720 MobiDBLite consensus disorder prediction 168 187 - -
Rops10g01392 720 FunFam Phox (PX) domain-containing protein 46 182 - -
Rops10g01392 720 SMART PX_2 55 160 IPR001683 GO:0035091
Rops10g01392 720 PANTHER PX DOMAIN-CONTAINING PROTEIN EREL1-RELATED 1 714 IPR044588 GO:0015031
Rops10g01392 720 Coils Coil 507 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01392 Rops-Chr10 26880550 26888583 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01392 - - gmx:100792151 1275.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01392 10 26880550 26888583 Rops10g01392 10 26880550 26888583 ECH