Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01391 ATGAAGCACACTTCATCTGAGGCAGTTCCTTCTCTTTCTTCCGCGCCTTCCTTCACAGACCAATCGCAAGCCGCCACGTCAGCGTCCTCATCGTCTGCGGCGGCGGAGGACCTGGCGTTAGGGTCAAGAGACGGAGGCGGCGCTCAGGAGACGGTGGCGGTGGATCGGCGAGGCGAATATTCCGCCGTGTGCCGATGGACGGTGCACAATTTCCCGAGAATAAAAGCTAGGGCACTGTGGAGCAAGTACTTCGAGGTAGGTGGTTACGATTGTCGCCTATTGATATACCCTAAGGGTGACTCACAGGCTCTACCAGGTTACATCTCAATCTACCTTCAAATCATGGACCCTCGTGGAACCTCTTCTTCCAAATGGGACTGTTTCGCGAGTTATCGCTTGGCAATCGTCAACGTCGCCGACGATTCCAAGACGATTCATCGCGATTCATGGCACCGTTTCTCCAGTAAGAAGAAATCGCACGGTTGGTGCGATTTCACGCCTTCTTCCACTGTTTTTGATCCGAAATTAGGTTATTTGTTCAACAATGATTCCGTATTGATCACTGCTGATATTCTTATTCTTAACGAGTCCGTTAATTTCACTCGCGATAACAATGAGTTGCAGTCTTCGTCGTCATCTTCTTCCTCTTCGTCTTCGTCTATGGTTGCGGGTCCTGTGTCTGATGTTTTGAGTGGGAAGTTCACGTGGAAAGTGCATAATTTCAGTTTGTTCAAGGAAATGATCAAGACGCAGAAGATAATGAGCCCGGTTTTCCCTGCTGGGGAGTGTAATTTGAGGATTAGTGTGTACCAGAGCTCGGTGAATGGCGTTGAGTATTTGTCAATGTGTTTGGAAAGCAAGGATACTGATAAGACTGTGGTGTTGTCTGATAGGAGTTGTTGGTGTTTGTTTAGAATGTCTGTGTTGAACCAGAAGCCTGGTTCGAATCATATGCATAGGGATTCCTATGGGCGTTTTGCAGCTGATAATAAGAGTGGTGACAATACCAGCTTGGGATGGAATGATTATATGAAGATGTCGGAATTTATTGGGCCTGATTCTGGGTTCCTTGTTGAAGACACTGCTGTTTTTAGTACCTCATTTCATGTGATCAAGGAGTTTAGCAGCTTCTCCAAGAACGGGGCTGTGATTGCGGGGAGAAGTGGGAGTGGTGCAAGGAAGTCAGATGGCCATATCGGAAAGTTCACTTGGAGGATTGAGAATTTTACAAGGTTGAAGGATTTGCTCAAGAAGAGGAAAATTACAGGTCTTTGCATCAAGAGCAGGAGGTTTCAGATTGGTAACAGGGATTGCCGTCTTATCGTTTATCCCCGAGGGCAGTCTCAGCCACCATGCCACCTTTCAGTGTTTCTTGAAGTTACGGATTCAAGAAATACTTCCAGTGATTGGAGTTGTTTTGTTAGTCATCGTTTGTCAGTTGTGAACCAGAGGATAGAGGATAAATCTGTCACCAAGGAATCTCAGAACCGCTACTCCAAAGCTGCAAAAGATTGGGGCTGGCGTGAATTTGTGACACTTACAAGTCTCTTTGATCAAGATTCAGGTTTTCTTGTCCAAGACACTGTCATATTCTCCGCTGAAGTTCTTATATTGAAAGAGACATCAATAATGCAGGATTTTTCTGAGCATGATTCCGAGTTAAGCAGCAGCAGTGGTTCCCTAATTGATAGTTATGGGAAAAGAAGTTCATTTACATGGAAAGTGGAGAATTTCCTGTCTTTTAAGGAAATAATGGAGACTCGAAAAATATTCAGTAAATTCTTTCAGGCCGGTGGATGTGAACTTAGGATTGGTGTGTATGAGTCGTTTGATACCATATGTATTTATTTGGAGAGTGACCAGGCTGTTGGTAGTGATCTCGATAAAAACTTCTGGGTCAGATACAGGATGGCTGTTGTGAATCAGAAGAACCCAGCCAAAACAGTGTGGAAGGAATCTTCTATCTGCACAAAGACATGGAATAATTCTGTTTTGCAATTCATGAAGGTGTCTGATATGTTAGAAGTAGATGCAGGGTTTCTTGTCCGTGACACTGTCGTTTTTGTATGTGAAATATTGGATTGCTGCCCTTGGTTTGAGTTTTCAGACTTAGAGGTTTTAGCTTCAGAGGATGATCAGGATGCATTGACAACTGATCCTGATGAATTGATTGACTCTGAAGACAGTGAAGGGATAAGTGGAGATGAGGAAGATATTTTCAGAAATCTTCTTTCTAGAGCTGGATTTCATTTAACATATGGAGATAATCCTTCTCAGCCACAAGTCACTTTAAGAGAGAAACTTTTAATGGATGCTGGTGCAATTGCTGGGTTTTTGACTGGACTTCGGGTTTATCTTGATGATCCTGCAAAAGTAAAGCGTTTGCTTCTACCTACCAAGCTCTCTGGTAGTTGTGATGGGAAGAAAACCACCAAGGCTGATGAGTCTTCTCCAAGTTTGATGAATTTACTGATGGGAGTTAAAGTCTTGCAGCAAGCAATCATTGATTTACTATTGGATATAATGGTTGAATGCTGCCAACCTTCTGAAGTGGGTCCTGTTGCTGATTCTGTTGATGCATGCTCAAAACCTTCTCCGGATGGAAGTGGAGCTGCTAGTCCTCTTGAATGTGATAGAGAAAATAGAGCAACAGAGTCCGCACAAGTTCCTGTTTATGAGAGATTGGATTCTGCTGTAGAAGAAAACAGTAGTACATCTGCTGTCCAGAGCTCTGATTTAAATAGGAATGCTACTCAGGAAAAAGCTCTTCCTGGACAGCCTATTTGTCCACCGGAAACGTCTGCCACTGATTCAGAAAATTCTTCCTTTCGGTCGAAGACCAAGTGGCCAGAACAGTCTGAGGAGCTCTTAGGTTTGATTGTAAACTCACTAAGAGCTTTGGATGGGGCTGTTCCGCAAGGTTGTCCAGAGCCAAGACGGCGACCTCAGTCTGCACAGAAAATTGCTCTGGTATTGGACAAGGCTCCTAAGCATTTGCAAGCAGACCTTGTTGCACTGGTACCCAAATTGGTTGAGCAGTCGGAACACCCACTTGCTGCCTGTGCACTTCTTGAGCGGCTTCAAAAGCCAGATGCAGAACCTGCTTTACGAATACCTGTTTTTGGGGCTCTTAGTCAATTGGAGTGTGGTAGTGAAGTCTGGGAACGCATTCTTTTTCAGTCATTTGAGCTTTTGACAGACTCAAACGATGAACCCCTTGCTGCAACAATAGATTTTATATTCAAAGCAGCATCTCAATGTCAACACCTCTCTGAAGCAGTTAGGTCTGTTCGTGTCAGGCTGAAAAATCTAGGTCTTGAGGTGTCGCCTTGTGTCCTTGACTTTTTAAGCAAGACTATAAATAGTTGGGGGGATGTTGCTGAAACCATGCTCAGGGACATTGATTGTGACGATGATTATGGTGACAGTTGCTCAGCTCTGCCATGTGGGATTTTCTTATTTGGTGAACATGGCACTGCTCCTACTGGACTGCATGTGATTGATGATCAGACTTTTCGTGCCAGTCGTCATTTTTCTGATATTTATATACTGTTTGAGATGCTTTCTATTCCTTGTCTTGCCGTCGAAGCTTCTCAAACATTTGAGAGAGCTGTAGCTCGAGGTGCAATTGATGCTCAGTCTGTAGCCCTGGTATTGGAAAGTCGTCTTTCGCAAAGATTGAATAATAATGCCAGATATGTTTCAGAAAATTTTCAAAATTCAGATGGTGCAACAGAGGGAGATGCTTGTGATCAATTGGGAGTTCAAAGGGATGATTTTACTTCAGTTCTTGGTCTTGCTGAAACTTTGGCCCTCTCCAGAGACCCATGTGTGAAAGAATTTGTTAAATTACTCTACATGATAATGTTTAGATGGTATGCTAATGAATCTTATCGGGGGAGGATGCTGAAGAGGCTTGTTGACCGTGCCACCAGCACTACTGATAATGGTCGTGAAGTAGATTTTGATTTGGATATCTTGGTTACGTTGGTCTGTGAGGAGCAGGAGATTATTAGGCCTGTTTTGAGTATGATGCGAGAAGTTGCTGAACTTGCCAATGTTGATCGGGCTGCTCTATGGCACCAGCTATGTGCTAGTGAAGATGAAATTATTCGTGTTCGTGAAGAAAGCAAAACTGAGATTTCTAATATGGCTAGGGAAAAAGCTATTATATCACAAAAGCTGAGTGAATCTGAGGCCACAAACAATCGTCTCAAGTCTGAAATGAGGGCTGAGACGGATCGGTTTTCTCGAGAAAAGAAGGAGCTTGGAGAACAAGTTCAAGAAGTTGAGAGTCAGCTTGAATGGCTTCGCTCAGAGCGGGATGATGAAATAGCAAAGCTCTCTGCTGAGAAGAAAGCTCTTCATGACCGTTTGCATGATGCAGAGACACAACTTTCTCAATTGAAGTCTCGGAAACGTGATGAATTGAAGAAAATAGTCAAGGAGAAAAATACACTTGCTGAAAGATTGAAGAATGCTGAAGCTGCACGTAAGAGATTTGATGAAGAATTGAAAAGATTTGCAACAGAGAATGTAACTCGGGAAGAAATCCGGCAATCACTTGAGGATGAAGTTCGTAGATTGACTCAAACAGTTGGGCAAACTGAGGGAGAAAAGCGGGAAAAGGAAGAACAGGTTGCTAGGTGTGAAGCATATATTGATGGCATGGAATCAAAGTTGCAAGCATGCCAGCAATATATTCACACGCTTGAGGCCTCACTCCAGGAGGAAATGTCACGACATGCACCTCTATATGGTGCTGGTTTGGAGGCTCTATCAATGAAAGAGTTGGAAACACTATCACGCATTCATGAAGAAGGGCTGAGGCAGATCCATACCCTTCAACAGCGGAAAGGGAGTCCTGCAGGGAGTCCTCTGTTGAGTCCCCATGCTCTCCCTCATCACAACCATGGATTATATCCTGCCGCATCACCCCCAATGGCAGTGGGACTGCCTCCCCCGATCATCCCAAATGGCGTAGGGATCCATAGCAACGGGCATGTGAATGGTGCAGTTGGACCCTGGTTTAACCACTCTTGA 5043 0.442 MKHTSSEAVPSLSSAPSFTDQSQAATSASSSSAAAEDLALGSRDGGGAQETVAVDRRGEYSAVCRWTVHNFPRIKARALWSKYFEVGGYDCRLLIYPKGDSQALPGYISIYLQIMDPRGTSSSKWDCFASYRLAIVNVADDSKTIHRDSWHRFSSKKKSHGWCDFTPSSTVFDPKLGYLFNNDSVLITADILILNESVNFTRDNNELQSSSSSSSSSSSSMVAGPVSDVLSGKFTWKVHNFSLFKEMIKTQKIMSPVFPAGECNLRISVYQSSVNGVEYLSMCLESKDTDKTVVLSDRSCWCLFRMSVLNQKPGSNHMHRDSYGRFAADNKSGDNTSLGWNDYMKMSEFIGPDSGFLVEDTAVFSTSFHVIKEFSSFSKNGAVIAGRSGSGARKSDGHIGKFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPCHLSVFLEVTDSRNTSSDWSCFVSHRLSVVNQRIEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVIFSAEVLILKETSIMQDFSEHDSELSSSSGSLIDSYGKRSSFTWKVENFLSFKEIMETRKIFSKFFQAGGCELRIGVYESFDTICIYLESDQAVGSDLDKNFWVRYRMAVVNQKNPAKTVWKESSICTKTWNNSVLQFMKVSDMLEVDAGFLVRDTVVFVCEILDCCPWFEFSDLEVLASEDDQDALTTDPDELIDSEDSEGISGDEEDIFRNLLSRAGFHLTYGDNPSQPQVTLREKLLMDAGAIAGFLTGLRVYLDDPAKVKRLLLPTKLSGSCDGKKTTKADESSPSLMNLLMGVKVLQQAIIDLLLDIMVECCQPSEVGPVADSVDACSKPSPDGSGAASPLECDRENRATESAQVPVYERLDSAVEENSSTSAVQSSDLNRNATQEKALPGQPICPPETSATDSENSSFRSKTKWPEQSEELLGLIVNSLRALDGAVPQGCPEPRRRPQSAQKIALVLDKAPKHLQADLVALVPKLVEQSEHPLAACALLERLQKPDAEPALRIPVFGALSQLECGSEVWERILFQSFELLTDSNDEPLAATIDFIFKAASQCQHLSEAVRSVRVRLKNLGLEVSPCVLDFLSKTINSWGDVAETMLRDIDCDDDYGDSCSALPCGIFLFGEHGTAPTGLHVIDDQTFRASRHFSDIYILFEMLSIPCLAVEASQTFERAVARGAIDAQSVALVLESRLSQRLNNNARYVSENFQNSDGATEGDACDQLGVQRDDFTSVLGLAETLALSRDPCVKEFVKLLYMIMFRWYANESYRGRMLKRLVDRATSTTDNGREVDFDLDILVTLVCEEQEIIRPVLSMMREVAELANVDRAALWHQLCASEDEIIRVREESKTEISNMAREKAIISQKLSESEATNNRLKSEMRAETDRFSREKKELGEQVQEVESQLEWLRSERDDEIAKLSAEKKALHDRLHDAETQLSQLKSRKRDELKKIVKEKNTLAERLKNAEAARKRFDEELKRFATENVTREEIRQSLEDEVRRLTQTVGQTEGEKREKEEQVARCEAYIDGMESKLQACQQYIHTLEASLQEEMSRHAPLYGAGLEALSMKELETLSRIHEEGLRQIHTLQQRKGSPAGSPLLSPHALPHHNHGLYPAASPPMAVGLPPPIIPNGVGIHSNGHVNGAVGPWFNHS* 1681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01391 1680 SUPERFAMILY TRAF domain-like 400 541 - -
Rops10g01391 1680 PANTHER TRAF-LIKE FAMILY PROTEIN 24 1680 - -
Rops10g01391 1680 MobiDBLite consensus disorder prediction 855 948 - -
Rops10g01391 1680 Coils Coil 1519 1546 - -
Rops10g01391 1680 SUPERFAMILY TRAF domain-like 569 693 - -
Rops10g01391 1680 MobiDBLite consensus disorder prediction 1401 1419 - -
Rops10g01391 1680 ProSiteProfiles MATH/TRAF domain profile. 231 368 IPR002083 GO:0005515
Rops10g01391 1680 Gene3D - 1438 1628 - -
Rops10g01391 1680 SUPERFAMILY TRAF domain-like 229 374 - -
Rops10g01391 1680 Coils Coil 1395 1511 - -
Rops10g01391 1680 SMART math_3 404 516 IPR002083 GO:0005515
Rops10g01391 1680 SMART math_3 573 673 IPR002083 GO:0005515
Rops10g01391 1680 SMART math_3 63 171 IPR002083 GO:0005515
Rops10g01391 1680 SMART math_3 236 349 IPR002083 GO:0005515
Rops10g01391 1680 MobiDBLite consensus disorder prediction 931 947 - -
Rops10g01391 1680 ProSiteProfiles MATH/TRAF domain profile. 61 191 IPR002083 GO:0005515
Rops10g01391 1680 MobiDBLite consensus disorder prediction 898 921 - -
Rops10g01391 1680 CDD MATH 232 364 IPR002083 GO:0005515
Rops10g01391 1680 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 47 198 IPR008974 GO:0005515
Rops10g01391 1680 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 227 374 IPR008974 GO:0005515
Rops10g01391 1680 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 391 544 IPR008974 GO:0005515
Rops10g01391 1680 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 560 694 IPR008974 GO:0005515
Rops10g01391 1680 CDD MATH 65 191 IPR002083 GO:0005515
Rops10g01391 1680 CDD MATH 570 692 IPR002083 GO:0005515
Rops10g01391 1680 SUPERFAMILY TRAF domain-like 60 199 - -
Rops10g01391 1680 MobiDBLite consensus disorder prediction 1 32 - -
Rops10g01391 1680 MobiDBLite consensus disorder prediction 1615 1640 - -
Rops10g01391 1680 MobiDBLite consensus disorder prediction 1398 1419 - -
Rops10g01391 1680 CDD MATH 400 535 IPR002083 GO:0005515
Rops10g01391 1680 Pfam MATH domain 431 537 IPR002083 GO:0005515
Rops10g01391 1680 Pfam MATH domain 581 688 IPR002083 GO:0005515
Rops10g01391 1680 Pfam MATH domain 70 193 IPR002083 GO:0005515
Rops10g01391 1680 ProSiteProfiles MATH/TRAF domain profile. 568 692 IPR002083 GO:0005515
Rops10g01391 1680 ProSiteProfiles MATH/TRAF domain profile. 399 535 IPR002083 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01391 Rops-Chr10 26844516 26855261 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01391 - - ccaj:109798115 3079.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01391 10 26844516 26855261 Rops10g01391 10 26844516 26855261 ECH