Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01383 ATGGGTACTCTGTCTCTTCGGAAGTGTTACAGGCCATTTTACTCTATGGTTTTCCCCTACTCAGCTCGAGCCATTTTGCCCAGTGTCAGCCCCGTCATCTTCAGGAGGAAGAAACTTCCTTCATTTTGCGCCGCCTCATCCCAGCCGTTGACGGCGGAGAAGAATTGCGACGGTGGTAAGAGTTTCCGTTCGAAGAGTCCAACGCCGGAGGTGTGGCTGTACAACACCATGAGCAAAAAGAAGGAGCTTTTCAAACCCAAAGTGGAATCGAAAGTAGGAATGTATGTTTGTGGAGTCACCGCTTATGATTTCAGTCATATTGGACATGCTCGTGTCTACGTCAATTTCGACCTTCTTTACAGATATTTTAAGCATTTGGGATTTGAAGTCTGTTATGTTCGCAATTTTACTGATGTTGATGACAAGATAATTGCTAGAGCAAAGGAGTATGGTGAAGATCCAATCAGTTTGAGCCGACATTATTGTGAAGAGTTCTGTAAAGACATGGCAACTCTTAATTGTCTGCCTCCTTCAGTGGAACCAAAAGTCTCAGAGCACATTCCCCAAATCACTGATATGATTGAGAAGATTCTTAATAATGGATATGCCTACATTGTTGATGGGGATGTATACTTTAATGTAGAAAAATTTCCAGAATACGGGAGATTATCTAGTCGAGACCTAGAAGACAATCGAGCTGGTGAGAGGGTTTCTGTTGATTCAAGGAAGAAAAATCCTGCTGATTTTGCTCTTTGGAAGTCTGCAAAGCCAGGAGAGCCATTTTGGGAGAGTCCCTGGGGTCCTGGAAGACCTGGGTGGCATATTGAATGCAGTGCTATGAGTGCAACTTATCTTGGTTACTCTTTTGACATCCACGGTGGAGGGGTCGACCTTGTGTTTCCTCACCATGAAAATGAAATTGCTCAGAGTTGTGCTGCTTGTAAGAAAAGTGATATAAGCCTATGGGTGCACAATGGTTTTGTCACTGTTGATTCTGTGAAGATGTCTAAATCTCTGGGAAACTTTTTCACAATACGACAGGTTATAGATGTTTACCATCCACTGGCTTTGAGATATTTTTTGATGGGCGCCCATTATAGATCGCCTATTAACTACTCTCATATACAGCTCGAAAGTGCTTCAGACCGTGTTTTTTATATATACGAGACATTACATGAATGTGAAAGCTTTCTGAATCAGCATGATCAGACACTTAGGAAGGATTCCATCCCACCAGATACCTTGAGTATTATTGACAACTTCCATAATGTTTTTTTGACCTCAATGGCTGATGATCTTCACACTCCGGTTGTATTGGCTGGAATGTCTGACCCATTAAAATCAATTAATGACTTGCTGCATACTCGTAAGGGGAAAAAACAACAATTTCGAATAGAATCACTTGCAGCTTTGGAGAAGAGCATCGGGGATGTCCTTAATGTTTTAGGACTTATGCCTTCAAGTTATTCTGAGGTTTTGCAGCAGCTTAGGGAAAAAGCTTTAAAGCGTGCAAAGTTGACAGAAGATGAAGTGTTGCAGAAAATTGAAGAACGGGCTACTGCTAGAATACAAAAGGAGTATGCCAAATCAGATGCAATAAGGAAGGATTTGGCTTTTGTTGGTACTGCACTTATGGATAGTCCAAATGGCACAACTTGGAGGCCTACCATTCCTCTTTCGCTTCAAGAGCTGCTTAGTCAAGATAAGCTTCAATAA 1716 0.419 MGTLSLRKCYRPFYSMVFPYSARAILPSVSPVIFRRKKLPSFCAASSQPLTAEKNCDGGKSFRSKSPTPEVWLYNTMSKKKELFKPKVESKVGMYVCGVTAYDFSHIGHARVYVNFDLLYRYFKHLGFEVCYVRNFTDVDDKIIARAKEYGEDPISLSRHYCEEFCKDMATLNCLPPSVEPKVSEHIPQITDMIEKILNNGYAYIVDGDVYFNVEKFPEYGRLSSRDLEDNRAGERVSVDSRKKNPADFALWKSAKPGEPFWESPWGPGRPGWHIECSAMSATYLGYSFDIHGGGVDLVFPHHENEIAQSCAACKKSDISLWVHNGFVTVDSVKMSKSLGNFFTIRQVIDVYHPLALRYFLMGAHYRSPINYSHIQLESASDRVFYIYETLHECESFLNQHDQTLRKDSIPPDTLSIIDNFHNVFLTSMADDLHTPVVLAGMSDPLKSINDLLHTRKGKKQQFRIESLAALEKSIGDVLNVLGLMPSSYSEVLQQLREKALKRAKLTEDEVLQKIEERATARIQKEYAKSDAIRKDLAFVGTALMDSPNGTTWRPTIPLSLQELLSQDKLQ* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01383 571 Gene3D - 374 555 - -
Rops10g01383 571 PANTHER CYSTEINYL-TRNA SYNTHETASE 66 561 IPR024909 -
Rops10g01383 571 FunFam Cysteine--tRNA ligase CPS1, chloroplastic/mitochondrial 373 555 - -
Rops10g01383 571 SUPERFAMILY Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 411 555 IPR009080 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Rops10g01383 571 SUPERFAMILY Nucleotidylyl transferase 70 379 - -
Rops10g01383 571 NCBIfam cysteine--tRNA ligase 73 554 IPR015803 GO:0004817|GO:0005524|GO:0006423
Rops10g01383 571 Pfam tRNA synthetases class I (C) catalytic domain 84 380 IPR032678 -
Rops10g01383 571 CDD CysRS_core 72 373 IPR032678 -
Rops10g01383 571 FunFam Cysteine--tRNA ligase 70 371 - -
Rops10g01383 571 Gene3D HUPs 56 373 IPR014729 -
Rops10g01383 571 Hamap Cysteine--tRNA ligase [cysS]. 71 556 IPR015803 GO:0004817|GO:0005524|GO:0006423
Rops10g01383 571 PRINTS Cysteinyl-tRNA synthetase signature 130 139 IPR024909 -
Rops10g01383 571 PRINTS Cysteinyl-tRNA synthetase signature 259 277 IPR024909 -
Rops10g01383 571 PRINTS Cysteinyl-tRNA synthetase signature 290 311 IPR024909 -
Rops10g01383 571 PRINTS Cysteinyl-tRNA synthetase signature 94 105 IPR024909 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01383 Rops-Chr10 26791344 26800919 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01383 K01883 - gmx:100786700 1002.66