Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01376 ATGTACAGAGTAGCAAACGCATCAGAATACCTGGTTATCACTGGGGTTGGAATCAGAGACATAAAGCTAGCAAAGAAAGCATGGGTTCTCCCAGGCCAATCATGCACTGTCTTCGACCTTTCACCTGTGAACTACACCTTCGAAGTCCAAGCCATGAGTGCAGAGAAGCTCCCTTTCATCCTCCCTGCTGTATTCACAGTAGGTCCCAGAGTTGACCACCAAGAAAGCCTTCTCAAATATGCTAAACTCCTCTCATCCCATGACAAGCTCTCTAACCATGTCAAGGAGCTTGTCCAAGGCATCATCGAGGGAGAGACACGTGTCCTTGCTGCCTCCATGACCATGGAAGAGATTTTCAGAGGCACCAAAGAGTTTAAACAGGAAGTGTTCGAGAAAGTTCAGCTGGAGCTTAACCAGTTTGGGCTTTTTATATACAATGCTAATGTTAAGCAACTGGTGGATGTGCCTGGTCACGAGTATTTCTCTTACTTGGGCCAAAAGACACAGATGGAAGCTGCAAACCAAGCTAAGGTGGATGTTGCAGAGGCCAAGATGAAGGGAGAGACTGGATCGAAACTGAGAGAAGGGCAAACACTACAGAATGCTGCGAGGATTGATGCAGAGACTAAGATCATATCGACGCAGAGGCAAGGAGAGGGTAAGAAGGAGGAAATAAAGGTGAGGACTGAAGTGAAGGTGTTTGAGAATGAGAGAGAGGCTGAGGTGGCTGAGGCCAATTCAGAGCTTGCTAAGAAGAAGGCTGCGTGGGCAAAGGCTGCACAGGTGGCTGAGGTGGAGGCTGCCAAGGCTGTGGCTCTTAGGGAAGCGGAGTTGCAGAGAGAGGTTGAGAGTATGAATGCTTTGACAACTACTGAGAAGCTTAGAGCTGATTTCCTTAGCAAAGCAAGTGTTGAGTATGAAACCAAGGTACAAGAGGCCAACTGGGATCTGTACAAGAAACAAAAAGCTGCGGAAGCAATTCTGTTTGAGAAGGAGAAAGAGGCAGAAGCACAGAAAGCATTAGCCGAGGCAGCATTTTTCTCTTGCCAGCAAGCAGCAGAAGCAGAGCTATACGCAAAGAAAAAGGAGGCAGAGGGGCTTGTGGCACTTGGACAAGCTCAAGGGGCATATTTAAGGACACTTCTCGATGCGTTGGGAGGCAACTATGCAGCTCTAAGAGACTACTTGATGATAAATGGTGGAATGTTTCAAGAGATTGCCAAGATTAATGCTGAGGCAATTCGTGGACTTCAGCCTAAGATTAGTATTTGGACTAATGGTAGTAATGGTGAAGTAACTGATGGAGGTGCTGTTGGTGGTGCCATTGGTATGAAGGAGGTTGCTGGTGTGTACAAAATGTTGCCACCTTTGTTTAAGACGGTCCATGAGCAAACGGGTATGCTGCCACCTGCTTGGATGGGAACCTTGCCCGACAAAAGTTCTTAG 1446 0.4737 MYRVANASEYLVITGVGIRDIKLAKKAWVLPGQSCTVFDLSPVNYTFEVQAMSAEKLPFILPAVFTVGPRVDHQESLLKYAKLLSSHDKLSNHVKELVQGIIEGETRVLAASMTMEEIFRGTKEFKQEVFEKVQLELNQFGLFIYNANVKQLVDVPGHEYFSYLGQKTQMEAANQAKVDVAEAKMKGETGSKLREGQTLQNAARIDAETKIISTQRQGEGKKEEIKVRTEVKVFENEREAEVAEANSELAKKKAAWAKAAQVAEVEAAKAVALREAELQREVESMNALTTTEKLRADFLSKASVEYETKVQEANWDLYKKQKAAEAILFEKEKEAEAQKALAEAAFFSCQQAAEAELYAKKKEAEGLVALGQAQGAYLRTLLDALGGNYAALRDYLMINGGMFQEIAKINAEAIRGLQPKISIWTNGSNGEVTDGGAVGGAIGMKEVAGVYKMLPPLFKTVHEQTGMLPPAWMGTLPDKSS* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01376 481 SUPERFAMILY Band 7/SPFH domain 33 172 IPR036013 -
Rops10g01376 481 Gene3D Band 7 domain 38 155 IPR036013 -
Rops10g01376 481 PANTHER FLOTILLIN-RELATED 1 478 IPR027705 -
Rops10g01376 481 Pfam SPFH domain / Band 7 family 22 184 IPR001107 -
Rops10g01376 481 Coils Coil 235 255 - -
Rops10g01376 481 CDD SPFH_flotillin 28 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01376 Rops-Chr10 26702883 26705521 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01376 K07192 - gmx:547522 758.444