Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01353 ATGGGATTTCCCTCACTTGGGATTAGAGCTATGAAAGTGGCTCACCACGGGTTGGGGATAATGAGGGGTTGGGCCATTTCATTTGCAGTGTGTATATTACAATACAAACTGACAAAGGAAGCTAAACAAGTCGATCTGGATAGTAAATCAGGTCGAACCGTGGCTTCCTCAGGGTCGCAGAGCCTGTCTCGAAGAAAACCTTCTTCTTCTTCTTCTTCGCAACCAACCGGGTCGACCCGGATTGTTTACAGGGAATCCAGGGAATCGGATCTCCCGATCTGGCAACGTAACTGGTTCATCGCATTGCTCTTCCTCATGGCTCTCGGATTCTTCGGTCTCGCTATCTTCCTTTTCCTCACACTCGATTCTGACATCGTTTTTTCTCCTTCTTCCACCGCCTCTGCCTCCGCCGCTACCTCCGAAGGCGTCGAGGTGCAGGTTACTTATGGCTCCGTTATAAAGCTTATGCACGAGAAGACCAAATTTCGGTTGCATTCTCACGATGTGCCTTATGGTTCTGGTAGTGGACAACAATCAGTTACTGGTTTTCCCAATGTTGATGATTCCAACAGTTACTGGATTGTTAGACCTCAGCCAGGAACTTCTGCTAAACAAGGTGACGCCATTAAGAGTGGCACTATCATTAAATTGCAGCACATGAGGACAAGGAAGTGGCTACACAGCCATTTGCATGCATCCCCAATATCAGGCAATCTCGAGGTAAGTTGCTTTGGAGGAGAATCTGAATCTGACACTGGGGACTATTGGAGGCTTCTAATAGAAGGAAGTGGGAAGACATGGAAGCAGGATCAGAGGATTCGGCTTCAGCATGTTGATACTGCAGGCTATCTACATAGTCATGATAAGAAATACTCTCGGATTGCCGGGGGACAGCAGGAGGTTTGTGGTGTTCGTGAAAAGCGTGCTGACAATGTCTGGTTGGCAGCCGAAGGTGTCTACCTTCCAGTTACTGAAAGCAAATGA 984 0.4776 MGFPSLGIRAMKVAHHGLGIMRGWAISFAVCILQYKLTKEAKQVDLDSKSGRTVASSGSQSLSRRKPSSSSSSQPTGSTRIVYRESRESDLPIWQRNWFIALLFLMALGFFGLAIFLFLTLDSDIVFSPSSTASASAATSEGVEVQVTYGSVIKLMHEKTKFRLHSHDVPYGSGSGQQSVTGFPNVDDSNSYWIVRPQPGTSAKQGDAIKSGTIIKLQHMRTRKWLHSHLHASPISGNLEVSCFGGESESDTGDYWRLLIEGSGKTWKQDQRIRLQHVDTAGYLHSHDKKYSRIAGGQQEVCGVREKRADNVWLAAEGVYLPVTESK* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01353 327 SMART mir_2 264 318 IPR016093 -
Rops10g01353 327 SMART mir_2 206 261 IPR016093 -
Rops10g01353 327 SMART mir_2 144 198 IPR016093 -
Rops10g01353 327 Pfam MIR domain 165 311 IPR016093 -
Rops10g01353 327 ProSiteProfiles MIR domain profile. 206 261 IPR016093 -
Rops10g01353 327 PANTHER STROMAL CELL-DERIVED FACTOR 2-LIKE PROTEIN 106 322 - -
Rops10g01353 327 FunFam Stromal cell-derived factor 2-like protein 130 327 - -
Rops10g01353 327 SUPERFAMILY MIR domain 145 318 IPR036300 -
Rops10g01353 327 MobiDBLite consensus disorder prediction 51 80 - -
Rops10g01353 327 ProSiteProfiles MIR domain profile. 144 198 IPR016093 -
Rops10g01353 327 ProSiteProfiles MIR domain profile. 264 318 IPR016093 -
Rops10g01353 327 Gene3D - 130 327 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01353 - - pcin:129303880 428.713