Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01352 ATGGCGTCTTCCGATAAAGAGCTTGAAGAACAGCTTCTAGAAGCTGGTAACGAGCTCGGAGATCCTCCGTCGTCGGTTGAGGAGCTTCTCTCCCTTTTAGATCGAGTCGAGAGTTGCTTGTCAAGGGTTGAACAGTCACCCACCAACTCTATGCAAATTGCACTGTCTCCATCGTTGAAAGCAATAATTGGGGATAAGCTTTTAAGGCATTCAGATGCTGATGTTAAAGTTGCAGTTGCCTCTTGCATTAGTGAAATAACAAGAATCACCGCACCTGATGCTCCATATGATGATGATCAAATGAAGGAGGTCTTTCAGTTAATTGTATCTTCATTTGAAAATCTACATGATAAGTCCAGCCGATCATATGCAAAAAGGACCTCAATTCTTGAAACTGTTGCAAAAGTCAGATCGTGTGTGGTAATGCTGGACCTGGAATGTGATGCCCTTATTTTGGAGATGTTTCAGCATTTCTTGAAGGCAATAAGGGAACATCATCCGGAGGATGTTTTTTCATCCATGGAGACAATTATGACCCTTGTTCTAGAGGAAAGTGAAGATATATCCCTGGATTTACTTTCTCCACTCATGGCCAGCATTAAGAAAGACAATGAGGAAGTTTTTCCAATTGCTCAAAAATTGGGGGAGAGGGTCCTTGAAAATTGTGCAACCAAGCTTAAACCCTACTTAGTGCAAGCAGTAAAAACCTTGGGCATATCTGTAGATGATTATAGTAAGGTTCTTGCTTCAATATGCCAAGATACATCAGATAGCATGGAGAAAAGTGATGTGTGTGTTACTAGTGAGCATGTAGAAGATAAGGGCGTGTCAGCAAAACAATCACTGGAGGAGTCAACGCAAGTGGTTAGAGAGGATGCAAATGAAGCTGCACATTCTCAACAAGATAATCCTGATGGAAACAGATCTCCCAAGTCAGTCATGAGCAATGGCGTTGCATGTATCGAAGAAGATAATGCTTTAGCAGATTCTAAGTCCATTAAAATGGAAGAGAATGCTGATTGTTCTGACACATCCAAAGGTTTGGATGTATCTGGTCGTGAGGAGCTCAATGATTTGAGTGCTGAAAAAGTTGACAATAATGAACAAAAGCCAGAACAAGCTACCAAGAGGCGAGGGAGGAAATCAAGCTCTTCAACTAAGTCGGCAAAACCTTCGGGGGGTCAAGTTTTTGCTGATGAGAAGGAAGCTGAGAAAATGCTTGATTCTGAAAGTCACAGCAAGGAAGCTCCCAGTTCCCCTCACGAGGACCTTTCTGTTGAAGCAGCAGGACCTTTAGAGAATGACAACGAGATTCACTCTACGTCACCAAAAGCATGCAATGATGAATCTGAAGTTGTTTCTTCTCCTTCACCCAGTGAGAGCCTCCATGATGAAAATCATTCAAAGAAACTTGGAAACGCAAAAATGAAAGATAGTCGTACAAAAGAAGGGGCTGCAAAGGATGTTTCAAAGAAGGTGTCTGAAGGAGCTAGTAATTCGGAAGCCAAATCTGCCAGGCGGACAATGAAGAAGGTGCTTGGTCGGAACTCTGATGTGAAAAAAACTACTGTGGCAGATTCAGTCAAAAAAGGAAGTGGGGCAAGCGATGCTGATGCTAAAATGCACTCGGCCAAGAAATTAGATGAATACAAGGGCAGTGGTGGATCCTCTTCAAGGCAGCTGGAGGACAAGAAAAAATCAGGGCGGGGGAAGGCTAACTCTGAAACAGTTGTCGCAAAATTTTCTGCTCTAGATGTGGATAAGGAAATGGTATCTTCTCCAAGGTCTGGTACCAAATCCACCAAAGATGAAAATTCAGAGGAGACTCCCAAGACAAATGTGAAGAGGAAACGTGCTTCGGGAAAAGAAAATGAGTCTGATGCCAAGGAATATGGTGAAAACCTTGTTGGTTTACGGGTTGTAGTTTGGTGGCCTAAGGATCGTGAGTTTTACAAAGGTGTCATTGATTCTTTTGATTCTGCCAAAAAGAAGCACAAGGTGGTGTATGATGATGGTGATGAAGAAATATTAAATCTAAAGAAGGAAAAATGGAAGGCCCTCGAGGCTGATGTGGATGCAGATGGGGAAGAAGAAAGTGATCGAGCAAGTCTTGATGCTTCCACTGATATGCCCCCAAGGAAGAAAGGGAAATCAAGTGCTGGTGAATCAACTAAGCAAGGAAAGATGGATGCTTCTTCCAGAAGTGGTGGAGCAACAGGATCAAGTAGATCAAAGGGTGTATCTGTAAAATCTGGCCATAAGTCCAAAGATGGCAACAAATCCAAAGAATCCAAGATTATTAGCCAATCTGAGGATGAAGTTAGTAGAAAAGCCAAGGACAGAACTCCTAAAAGTGGTAGCAGTAAGTCTACTGCTGCTGCACAAAAAATTACTAGCAAATCCAAGAACACTGATACTTCCAAGACAAGCAAATCAAAGGATGATGACATTAGCCCGTCAAAACCCTCTGCCAAATCCAAGCAAGAAACCCCGAAGAGTGGAAAATCCAAGCAAAAAACCCCAAAGACTGCGGCTTCCAAGGGAAAGCTCCCCAAAAGCAGTGGAAAGTCTAATGGCAATGGTAGTGGCAAGGTGAAATCCGGTTTGTTGAAGAGGAAAGATTCAGAGGATGAGAACTCAAACGTTTCAGAAAAAGAGGTAGAAGATACAAAGGTTAAGACGTCAAGTTCATCTAAGGCACATGGAAGTCAGGCCAAGAGTGAAAAGAAGCGTCAAAGAACCTAG 2745 0.427 MASSDKELEEQLLEAGNELGDPPSSVEELLSLLDRVESCLSRVEQSPTNSMQIALSPSLKAIIGDKLLRHSDADVKVAVASCISEITRITAPDAPYDDDQMKEVFQLIVSSFENLHDKSSRSYAKRTSILETVAKVRSCVVMLDLECDALILEMFQHFLKAIREHHPEDVFSSMETIMTLVLEESEDISLDLLSPLMASIKKDNEEVFPIAQKLGERVLENCATKLKPYLVQAVKTLGISVDDYSKVLASICQDTSDSMEKSDVCVTSEHVEDKGVSAKQSLEESTQVVREDANEAAHSQQDNPDGNRSPKSVMSNGVACIEEDNALADSKSIKMEENADCSDTSKGLDVSGREELNDLSAEKVDNNEQKPEQATKRRGRKSSSSTKSAKPSGGQVFADEKEAEKMLDSESHSKEAPSSPHEDLSVEAAGPLENDNEIHSTSPKACNDESEVVSSPSPSESLHDENHSKKLGNAKMKDSRTKEGAAKDVSKKVSEGASNSEAKSARRTMKKVLGRNSDVKKTTVADSVKKGSGASDADAKMHSAKKLDEYKGSGGSSSRQLEDKKKSGRGKANSETVVAKFSALDVDKEMVSSPRSGTKSTKDENSEETPKTNVKRKRASGKENESDAKEYGENLVGLRVVVWWPKDREFYKGVIDSFDSAKKKHKVVYDDGDEEILNLKKEKWKALEADVDADGEEESDRASLDASTDMPPRKKGKSSAGESTKQGKMDASSRSGGATGSSRSKGVSVKSGHKSKDGNKSKESKIISQSEDEVSRKAKDRTPKSGSSKSTAAAQKITSKSKNTDTSKTSKSKDDDISPSKPSAKSKQETPKSGKSKQKTPKTAASKGKLPKSSGKSNGNGSGKVKSGLLKRKDSEDENSNVSEKEVEDTKVKTSSSSKAHGSQAKSEKKRQRT* 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01352 914 MobiDBLite consensus disorder prediction 850 864 - -
Rops10g01352 914 MobiDBLite consensus disorder prediction 462 490 - -
Rops10g01352 914 MobiDBLite consensus disorder prediction 331 379 - -
Rops10g01352 914 MobiDBLite consensus disorder prediction 397 421 - -
Rops10g01352 914 SUPERFAMILY ARM repeat 60 242 IPR016024 -
Rops10g01352 914 MobiDBLite consensus disorder prediction 1 24 - -
Rops10g01352 914 Gene3D - 626 681 - -
Rops10g01352 914 MobiDBLite consensus disorder prediction 299 314 - -
Rops10g01352 914 MobiDBLite consensus disorder prediction 785 805 - -
Rops10g01352 914 FunFam Binding protein 631 683 - -
Rops10g01352 914 Pfam Sister chromatid cohesion protein PDS5 protein 28 232 - -
Rops10g01352 914 MobiDBLite consensus disorder prediction 331 631 - -
Rops10g01352 914 MobiDBLite consensus disorder prediction 533 549 - -
Rops10g01352 914 MobiDBLite consensus disorder prediction 690 914 - -
Rops10g01352 914 MobiDBLite consensus disorder prediction 806 836 - -
Rops10g01352 914 MobiDBLite consensus disorder prediction 600 631 - -
Rops10g01352 914 MobiDBLite consensus disorder prediction 435 461 - -
Rops10g01352 914 CDD Tudor_Agenet_AtEML-like 636 685 - -
Rops10g01352 914 MobiDBLite consensus disorder prediction 750 784 - -
Rops10g01352 914 MobiDBLite consensus disorder prediction 504 525 - -
Rops10g01352 914 MobiDBLite consensus disorder prediction 290 314 - -
Rops10g01352 914 MobiDBLite consensus disorder prediction 722 748 - -
Rops10g01352 914 SUPERFAMILY Tudor/PWWP/MBT 634 676 - -
Rops10g01352 914 MobiDBLite consensus disorder prediction 867 895 - -
Rops10g01352 914 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 272 890 IPR039776 GO:0007064
Rops10g01352 914 SMART TUDOR_7 632 690 IPR002999 -
Rops10g01352 914 MobiDBLite consensus disorder prediction 700 721 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01352 Rops-Chr10 26255945 26266251 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01352 - - gmx:100809147 1199.11