Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01344 ATGTGTCTTTTGCTTTTGCTTTTTGCTGTTATCTCAATCACTATAGGGTGTAGGCTAATCATGAGACGCAATCTAGTGATTGGTGTGTATTATATGTTGGTGTTAGTGTTGTTGAGCAATCTCTATGATTCAACAGCATCCTCTCCACACTGTAAAGCATGGCTAGTACAATCCATTCCCACAGATATGCCCCACCTTTCCCTTGTTCCCGGTGTTCTCTTTACTGGGGATGTGCTTCGGTGGCTGGCTGCAAACTCCACCAAGAGGCTTGACATAATTGCTCAGTACTGGCAACTACTTGCTTCTCCTAATGACTCTCGCTCTGGGGATTATGGTTACTCTCAAAATCAGATGCACAAATTTGGTGCCCATCAAGGTGCTGCGGTTTATAAGGCATTAGATGCTGCTGCTGATCGTAATGTTAGTATAAGGTTGCTATCTCACTCTGGAGTCTATCCAACGTTTACCTTAGAACCATCCAAACTTGCTTCCGGAAGGCCAAATGTTAAGAACGTGACCTTGCTCCTAGAGGATTGGTGGGGCTCAGGCATTATTCATGCCAAAGTTTGGATATCTGATAGGAGGGATGTGTATATTGGATCTGCAAATAATGACTGGAAATCTCTCACACAGGTCAAGGAAGTCGGAATTTATCTTGTTGGTTGTCCTGAAATAGCTAAAAAGGTTGAGGTCTACTTCAACAATTTATGGACACTTGCATCTCTTAATTCTTCAGCTTACACAAAAACAGTGGTAGATCAACAGTGGCAAGTTGAAAGAAAGGTTCCTTGCTGGTCGCATTTCATTGATCCTAGGGAGAGGTGCAAGTCACCTCTTCCTCAATATCTGGAGACTCCTCATGTTGCAGGATATCCTATTCTGTCTGACCCTTATATGTTCGAAGTTTCAATTCAAACTCCAGGGAGTAACTATTCAACAAAGTTCCTCCAAGTCAGTTATCTCTCGTTTGCTCCCCCAGAGCTATCGTTTGGAAAATATCAGGCTGATGAGCAGGCATGGATTGATACAATTAAATCTGTTGGAATGAGGGAAACAGTTAGAATCAGTACCATGGACTGGCTGGGTCAGTCACAATTTTTGGACCAAACAATCTACTGGTCATCCCTATCCTCTACCATATCAGAGGTTGTGTTTTCCAAGCATGCAACAGTAAAGATATTGGTGGCATATTGGGCACATTTCATCAATAACACAGATGTGTACCTGAAGTCTCTCCTCTACTCCAACAATCTCTGCTCTTCATCAAAATACAACAAATGCTCTGGCAAAATTGAGATCAAATATTATGTGGTTCCAGGTTTCAACATGACAGGACCTGCCATTCAGGGTGGAACTAGTACAGGAAACAAATACCCTGGTTTTACCAGAGTCAATCATGGAAAATATGCAGTTAGTGATGTAAGGGCCCACATTGGGACTAGTAATCTTGTATGGGACTACTTCTATACAACAGCAGGTGTCAGCTTTGGGACATACAACACTGCCATAGTCTCTCAGCTGAGGGAAATTTTTGATGCTGACTGGAACTCACCCTATGCTGTTCCTGTCGAAGACCTGGAGAAAGGTCATACATGTTCAATCTAG 1605 0.4268 MCLLLLLFAVISITIGCRLIMRRNLVIGVYYMLVLVLLSNLYDSTASSPHCKAWLVQSIPTDMPHLSLVPGVLFTGDVLRWLAANSTKRLDIIAQYWQLLASPNDSRSGDYGYSQNQMHKFGAHQGAAVYKALDAAADRNVSIRLLSHSGVYPTFTLEPSKLASGRPNVKNVTLLLEDWWGSGIIHAKVWISDRRDVYIGSANNDWKSLTQVKEVGIYLVGCPEIAKKVEVYFNNLWTLASLNSSAYTKTVVDQQWQVERKVPCWSHFIDPRERCKSPLPQYLETPHVAGYPILSDPYMFEVSIQTPGSNYSTKFLQVSYLSFAPPELSFGKYQADEQAWIDTIKSVGMRETVRISTMDWLGQSQFLDQTIYWSSLSSTISEVVFSKHATVKILVAYWAHFINNTDVYLKSLLYSNNLCSSSKYNKCSGKIEIKYYVVPGFNMTGPAIQGGTSTGNKYPGFTRVNHGKYAVSDVRAHIGTSNLVWDYFYTTAGVSFGTYNTAIVSQLREIFDADWNSPYAVPVEDLEKGHTCSI* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01344 534 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 181 208 IPR001736 GO:0003824
Rops10g01344 534 Gene3D Endonuclease Chain A 76 241 - -
Rops10g01344 534 Gene3D Endonuclease Chain A 323 518 - -
Rops10g01344 534 PANTHER PHOSPHOLIPASE D - RELATED 46 532 - -
Rops10g01344 534 Pfam PLD-like domain 124 237 IPR025202 -
Rops10g01344 534 CDD PLDc_vPLD3_4_5_like_2 320 516 - -
Rops10g01344 534 SUPERFAMILY Phospholipase D/nuclease 82 239 - -
Rops10g01344 534 SUPERFAMILY Phospholipase D/nuclease 328 530 - -
Rops10g01344 534 CDD PLDc_vPLD3_4_5_like_1 55 222 - -
Rops10g01344 534 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 461 487 IPR001736 GO:0003824
Rops10g01344 534 SMART pld_4 461 487 IPR001736 GO:0003824
Rops10g01344 534 SMART pld_4 181 208 IPR001736 GO:0003824
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01344 K16860 - gmx:100778897 861.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01344 10 26154262 26159088 Rops10g01344 10 26154262 26159088 ECH