Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01336 ATGGCGTTGGTGAATCCATTTCTCCCCCAAACCAAAACTTCTATGGCCCTGCATGTTCCTGCTTCACCATCCAAGCAACTGCTGCTTTGGACTCTCACTCCCCTTCAGTTCAAACCAGTGTCACCATCAAGAACGAAGCACGCTAGGTTTGGTGCCACTGCCGATATCAAAGCTGTGCCTTTACTTGATGGGCCAGAAGATCACAAGGTTCTCGTGGATCCTTCCAGTGAGGAGGAACGGAAAGGTGAGAGGGTAGTTGCGGATTATGACTGGACACAGGAATGGTACCCTTTGTACCTCACTAAGAATGTGCCTGATGATGCACCCCTTGGTCTCAAAGTGTTTGATAAGGACCTCGTATTGTTCAGGGATGGTAATGGCCAGTTTCTCTGTTATGAAGATCGCTGCCCCCATAGGTTAGCAAAATTATCTGAAGGCCAGTTGATAGATGGAAGGCTTGAGTGCCTATACCATGGATGGCAATTCGAAGGTGAGGGCAAATGTGTGAAGATACCTCAGCTTCCAGCTGATGCCAAAATTCCTCGGTCAGCCTGTGCTAAAACATACGAGGTGAGGGACTCTCAAGGTGTTATTTGGGTATGGATGTCTCCAAAGACACCTCCAGATGTCAGTAAAATACCTTGGTTTGAGAACTTTGCAAGGCCAGGGTTTCAAGATGTTTCAACAACTCATGAACTCCCATATGATCACTCTATTCTTCTGGAAAACCTGATGGATCCTGCTCATGTCCCGATCTCACATGATAGAACAGATTGGACTGCAAAAAGAGAGGATGCACAGCCACTGTGTTTTGAGGTGACTGAACGAACTGATAGAGGGTTTGCAGGTTGGTGGGGCAGAGAGAAAGATGGGTCTATGCTTAACTTCTTACGGTTTGAGGCTCCTTGTGCTCTACAAAATAACAGGGAAACTGTCGATAAAAATGGGGAAAGAAACTACATGTCTGGTCTGTTCCTTTGTAGACCAACTGGGCAAGGGAAATCCATGCTGATAGTGAGGTTTGGATCAACAAAAAGATCTCCGCTAGCAAAACTGTTTCCTGCATGGTACTTCCATCAGAATGCGAGCAAGGTGTTTGAGCAAGACATGGGATTCTTATCATCCCAAAACGAAATTCTCTTGAAAGAGAAGGTTCCAACAAAGGAACTATACCTGAATCTAAAATCATCAGACACATGGGTTGCTGAATACCGCAAGTGGATGGACAGAGTGGGACATGGGATGCCATATCATTTTGGTCACAGTACTATTTCCTTACCCAAAGAGCCTGCTGTGGTAGAACATGCACCTGCTGGACTCATTGCAGGACTATCAGCTTCCTTACCTGCCAAGGGGGGCATTGGAACAATGCATGCCCCAAATTTAGCCAATAGATATTTTAGGCATGTAATACATTGCAAAGGATGTAGAACCGTCGTCAAAGCTTTCCAAGCTTGGAAAAATGCCCTTTCAGCTGTGACCGTGGCATTAGCTGCATTGGCAATTCTGGTATCTGGGAGACAATGGAAAGCGCTTCTGTTAGTATCTGCATCTCTGTGCTCTGTTGGAGCATATGCTTGCTCAACCGCTATTGCAATGAATACAACAAACTTTATTAGGACACACAGGAGATTGTGA 1638 0.4567 MALVNPFLPQTKTSMALHVPASPSKQLLLWTLTPLQFKPVSPSRTKHARFGATADIKAVPLLDGPEDHKVLVDPSSEEERKGERVVADYDWTQEWYPLYLTKNVPDDAPLGLKVFDKDLVLFRDGNGQFLCYEDRCPHRLAKLSEGQLIDGRLECLYHGWQFEGEGKCVKIPQLPADAKIPRSACAKTYEVRDSQGVIWVWMSPKTPPDVSKIPWFENFARPGFQDVSTTHELPYDHSILLENLMDPAHVPISHDRTDWTAKREDAQPLCFEVTERTDRGFAGWWGREKDGSMLNFLRFEAPCALQNNRETVDKNGERNYMSGLFLCRPTGQGKSMLIVRFGSTKRSPLAKLFPAWYFHQNASKVFEQDMGFLSSQNEILLKEKVPTKELYLNLKSSDTWVAEYRKWMDRVGHGMPYHFGHSTISLPKEPAVVEHAPAGLIAGLSASLPAKGGIGTMHAPNLANRYFRHVIHCKGCRTVVKAFQAWKNALSAVTVALAALAILVSGRQWKALLLVSASLCSVGAYACSTAIAMNTTNFIRTHRRL* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01336 545 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 18 492 - -
Rops10g01336 545 Pfam Pheophorbide a oxygenase 299 384 IPR013626 GO:0010277
Rops10g01336 545 Gene3D - 90 219 IPR036922 GO:0051537
Rops10g01336 545 Pfam Rieske [2Fe-2S] domain 94 175 IPR017941 GO:0051537
Rops10g01336 545 SUPERFAMILY ISP domain 88 210 IPR036922 GO:0051537
Rops10g01336 545 Gene3D - 222 413 - -
Rops10g01336 545 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 95 200 IPR017941 GO:0051537
Rops10g01336 545 SUPERFAMILY Bet v1-like 195 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01336 Rops-Chr10 26091722 26094221 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01336 - - gmx:100818625 961.059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01336 10 26091722 26094221 Rops10g01336 10 26091722 26094221 ECH