Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01332 ATGAGGAATGCCTTCACCGCTCTCTACCGTCATCGCGGTGCCATTCCTATGTCCTCGAAATTACAGCATGAGAGTACACTGGAATATCTGAAACATATCGAGGTGGTTAGGAGGCTCGATTACTGGTCCTCCACGTCTTACTTGTTGCACCGAAATTCATATTCAACTGGTTTTACCAGTGTGCATGGTGAAACGCCATCTGCTGAGTATGCAAGGATAAGGAGGGAATTACTGGAAAATAAATTTGGGCTTACTCTTGGAATTTATAGCTCCAAGAGTTTCAAAGCTGTATACCGCTTTGGTCCCTTTTTGGCTTTGTACAGGGCAGCAATTATTTCATATCACGTGTTAAGGCTAACAATATGGCGGTTGTTTGTTCAAGACATTAAAAAACGTGCAATTAAGTTTCGTGAAACTCTAATACGCTTGGGTCCTTTCTACATTAAGCTCGGGCAGGCATTGAGCACTAGGCCTGACATATTACCAACTGTATATTGTCAAGAACTTGCTAAGTTACAGGATCAAATACCCCCATTTCCAACTGATGTTGCTATCAGATCTATTGAAACCCAGTTGGGTGTTCCTATTGATAAAATTTTTAGTGACATTAGCCCAGCGCCTATTGCAGCAGCTTCCTTAGGACAAGTTTATAAAGCTCACCTGCATTCTGGAGAGCTGGTAGCTGTAAAAGTACAGAGGCCTGGTATGTCACTTTCATTGACCCTTGATGCTTTGTTATTCCATATGATTGGAGACCAGTTAAAACGGTTTGCCAAGGCTCGCAAAGATCTTCTAGTAGCAGTGAATGAAATGGTCAGGCACATGTTTGATGAAATTGATTATGTCCTAGAGGGAAAAAATGCTGAGCGCTTTGCTTCTCTCTACTGTTGGTCTGCAAGTGGAGGTAATATTAAACACAAAAGAATGAAGTCTGTCAAAGCTCCAAAAATATATTGGGACTATACATGCCCCACTATACTGACTATGGAGTGGATAGATGGAATTAAGCTTACAGATGAGACAGGCTTGAATGAAGCTTCTTTGAACAGAAAGGAACTCATTGACCAGGGATTATACTGCTCTTTGAGGCAACTGCTTGAGGTCGGTTATTTCCACGCTGATCCTCATCCGGGAAACCTTGTTGCAACAAATGATGGATCACTTGCATATTTTGACTTTGGAATGATGGGGGATATTCCTAGGCATTACCGGATTGGACTTATTCAAGTGATTGTGCATTTTGTTAATCGTGACTCTCTGAGCTTGGCAAATGATTTCCTTTCTTTGGGATTTATTCCTGAAGGGGTTGATATACATTCAGTTTCTGTTGCACTGCAAGCTTCGTTTGCTGATCAGACCACTGAATCTCAAGATTTCCAGGGACTTATGAATCAACTATATGATATCATGTATGAATTTAACTTCTCACTCCCACCAGACTATGCTCTTGTTATAAGAGCATTGGGATCACTAGAAGGGACAGCTAAAGCTCTGGATCCTGATTTTAAAGTCATTGAGAGTGCATATCCTTTTGTCATTGGGAGACTTATAGCAGACCCAAGTCCTGATATGAGAAGAATTTTAAGGGAACTTGTCATTCGTAACAATGGATCCATAAGGTGGAACCGGCTAGAGCGCCTGGTAGCAGCAATATCTGAACAGGCTTCTGAGCTAACTGGAGACCCTAGTCCTGAAAAGTTTTCAAGTTCTTCTCTTTGGAAATCATTTGACATGCATGCTGTTATTGATTCCACTGAAGATCTTTTATTATTCATATTATCAAAGAAGGGGCGCAGGGTGCGTCATTTCCTTCTTCGGGATATAGTAGAAGCTGCTGATGTGTTTCTGCAAGATGAAGTGATTGATTGCGCATTAAATGAGAAGCTTGAAGGCCAGAGGATGTTGCTCTTTGAGGAGCGTGCTATCCTCGCTAGGATTGGAAAGGGATTTCAATGCCTTAATGAGGTGGTGAAGTTGGCTCCAGAGGAGTGGACAGGAATGCTTATTAGGATGGCAGTGAAGCCAGAGGTTCACAAATTTGCTTTAGACATTATTTCAGCTTTAGCTTTGCATTCTAGTCACAGATTGCAGGAAGCTTGTTGGCTCTATTTGTCGAGACTTCTTCACAAATTTTCAAATTAG 2142 0.4155 MRNAFTALYRHRGAIPMSSKLQHESTLEYLKHIEVVRRLDYWSSTSYLLHRNSYSTGFTSVHGETPSAEYARIRRELLENKFGLTLGIYSSKSFKAVYRFGPFLALYRAAIISYHVLRLTIWRLFVQDIKKRAIKFRETLIRLGPFYIKLGQALSTRPDILPTVYCQELAKLQDQIPPFPTDVAIRSIETQLGVPIDKIFSDISPAPIAAASLGQVYKAHLHSGELVAVKVQRPGMSLSLTLDALLFHMIGDQLKRFAKARKDLLVAVNEMVRHMFDEIDYVLEGKNAERFASLYCWSASGGNIKHKRMKSVKAPKIYWDYTCPTILTMEWIDGIKLTDETGLNEASLNRKELIDQGLYCSLRQLLEVGYFHADPHPGNLVATNDGSLAYFDFGMMGDIPRHYRIGLIQVIVHFVNRDSLSLANDFLSLGFIPEGVDIHSVSVALQASFADQTTESQDFQGLMNQLYDIMYEFNFSLPPDYALVIRALGSLEGTAKALDPDFKVIESAYPFVIGRLIADPSPDMRRILRELVIRNNGSIRWNRLERLVAAISEQASELTGDPSPEKFSSSSLWKSFDMHAVIDSTEDLLLFILSKKGRRVRHFLLRDIVEAADVFLQDEVIDCALNEKLEGQRMLLFEERAILARIGKGFQCLNEVVKLAPEEWTGMLIRMAVKPEVHKFALDIISALALHSSHRLQEACWLYLSRLLHKFSN* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01332 713 SUPERFAMILY Protein kinase-like (PK-like) 173 406 IPR011009 -
Rops10g01332 713 CDD ABC1_ADCK3-like 171 426 - -
Rops10g01332 713 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 78 696 - -
Rops10g01332 713 Pfam ABC1 atypical kinase-like domain 171 423 IPR004147 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01332 Rops-Chr10 26046151 26055009 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01332 K08869 - gmx:100811652 1206.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01332 10 26046151 26055009 Rops10g01332 10 26046151 26055009 ECH