Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01309 ATGGAATGTAATGATGGACAACAAGGCCGAAGTGTAAGTTTGAAGAGAAAGTCACCAGATCATCCATTCTTCAACAGCTTTTCTCTGGATGACCTTAATGAAGATCTCTTCGAAAGGATACTTTCATGGCTGCCAACTTCCAAATTCTTTCGCCTTACTTCTGTGTGCAAAAGATGGAAATCAATAGCTGCTTCTTCCAGTTTCAAGCTTGCCTGCTCTCGCATTCCTTCAAGGGATCCTTGGTTTTTTATGGTTGCTCCCAACCTCAACCAATCTGTTATCTTTGACTCTGCTGAAAGCACTTGGAAGAGACTCAATCACCCTCCTTTTCTGCTTGAAGAATCTAACCGAGGTTGTATGCCAGTTGCAGCCTCTGGTGGCTTGATTTGCTACCGTAAATCATCAGGAAATTTCATTGTAAGCAATCCCGTGACAGGATTTTGTAGCGAACTCCCTCCCTTGCATTTTGCCCCACAACATCAACCTCTCAATGCCATTGTGATGACCACAACTTCCAAAGAACCATTCTCCTTCAAAATTGTGTTAGTCTTTGGTGAACTTCCTAACCTTTTGTTTAAAGTCTACAATTCAAGCTCTGGCTGTTGGGAAGACGAGACAACACTGAGGAGAAAGGTTGATGATAATTCCATGGAATATGATTCAACAGATGACAATGTTGTATACTTCCTTAGTAAGGCTGGAACTGTGGTGGCAAGCAACATGCAGAGAAGCCCATCTAAGCAATATTCATCAGTTATTATTAACAAGGATGGTGAGGAGATTGTGTATTTTCTTAGCTCCTCAGGGACAGTAGTAGCTTGCAATTTGACCTGCAAGTGCTTCTTTGAGTACCCTAGGTTATTGCCTGTTTTTAGTGAGTATTCCATTGATGTTGTGGAGTGTAATGGGGAGATGCTAGTTGTTTTGTTATCAGAATTCTTGGAAACCGCAAGTCTTAGGGTGTGGAAATATGATGAGGCTAATAGAGGCTGGCACCAGATTGCTGCAATGCCTGCAGCAAATTCTCATGAGTGGCATGGAAAGAAGGCAGATATTAACTGTGTTGGGGCTGGTAACCAGATCTTTGTATGCTTGAACTCCCCTGACCTATGCACTTATATTCTATGTGATTTGGAGACCAACAAGTGGGTTGAATTGCCAAACTGTTGCATAAATGGTGAAGTCATAGACTTCATGTCTGCCTTTTCATTTGAGCCTAGGATAGAGGTTTCTGTGTGA 1239 0.4213 MECNDGQQGRSVSLKRKSPDHPFFNSFSLDDLNEDLFERILSWLPTSKFFRLTSVCKRWKSIAASSSFKLACSRIPSRDPWFFMVAPNLNQSVIFDSAESTWKRLNHPPFLLEESNRGCMPVAASGGLICYRKSSGNFIVSNPVTGFCSELPPLHFAPQHQPLNAIVMTTTSKEPFSFKIVLVFGELPNLLFKVYNSSSGCWEDETTLRRKVDDNSMEYDSTDDNVVYFLSKAGTVVASNMQRSPSKQYSSVIINKDGEEIVYFLSSSGTVVACNLTCKCFFEYPRLLPVFSEYSIDVVECNGEMLVVLLSEFLETASLRVWKYDEANRGWHQIAAMPAANSHEWHGKKADINCVGAGNQIFVCLNSPDLCTYILCDLETNKWVELPNCCINGEVIDFMSAFSFEPRIEVSV* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01309 412 PANTHER BNACNNG10540D PROTEIN 28 411 - -
Rops10g01309 412 Gene3D - 24 69 - -
Rops10g01309 412 SMART fbox_2 32 72 IPR001810 GO:0005515
Rops10g01309 412 CDD F-box_AtFBW1-like 30 68 - -
Rops10g01309 412 ProSiteProfiles F-box domain profile. 26 71 IPR001810 GO:0005515
Rops10g01309 412 Pfam F-box domain 29 68 IPR001810 GO:0005515
Rops10g01309 412 Gene3D - 83 401 IPR015915 GO:0005515
Rops10g01309 412 SUPERFAMILY Kelch motif 88 389 IPR015915 GO:0005515
Rops10g01309 412 SUPERFAMILY F-box domain 22 84 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01309 Rops-Chr10 25732808 25735098 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01309 - - gmx:100786481 730.709