Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01290 ATGCTTCCGTCGTTCATGAGCATCGCCGCCCTGTACAGCGGCTACCTCCGCCGCTGCTTCACAGGGGCAGGGCTGTCCTCACAATCCATCAACATAGATGATGAAACCACCATCCACTTCTGGGGTCCCAAAAATCAAAAGACCCAGAAACCTTCCCTGGTTCTGATTCACGGGTTTGGTCCCATGGCAATTTGGCAATGGCGTCAACAAGTCCAATCCTTCGCCCCTCACTTCAACGTTTACGTTCCTGACCTAATCTTCTTCGGAGGGTCAACGACAAAGTCCAATGAAAGAAGTGAGAGGTTTCAGGCAGAGTCTGTGGGGAAACTTCTGGAGAAGTTGGAGGTGAAGAGGTTCCACGTGGTTGGCACTAGCTATGGTGGGTTCGTGGCTTACCATTTGGCTAACATGTTTGGGGAAGACAGGGTTCATAAAGTGGTGATTGCCAGCTCAGGTGTTAACATGAGAAAGAGTGACAATGTGGCACTGTTGCAGAGGGCTCAATTGGAGAAGATTGAGGATCTTATGTTGCCTGCTACGCCTCAACATTTGCGGAATTTGATGACCTTGTCTGTCTCCAAACGTCTCCACATGGTGCCTGATTTTTTCTTGAAGGACTTCATCAATACATTATACTCAGAAAATAGGAAGGAAAAGATGGAGCTTCTAAAAGGCATATCCCTAGGTAGGGATGATAATTCCAGCATCTCACCTCTTCAACAGGAGGTTCTCATAGTCTGGGGAGATCATGACCAGATATTTCCCGTGCGGATAGCCCATGAACTGAAAAAGGTAATCAGTAAGAAGGCAAGATTGGAATTGATAAAGGATGCATCGCATGTGCCTCAAATTGAAAAGCCCGGCGAATTTAATAACATTGTCCTAAACTTCTTGCGCTCGAGTTCATGA 909 0.4697 MLPSFMSIAALYSGYLRRCFTGAGLSSQSINIDDETTIHFWGPKNQKTQKPSLVLIHGFGPMAIWQWRQQVQSFAPHFNVYVPDLIFFGGSTTKSNERSERFQAESVGKLLEKLEVKRFHVVGTSYGGFVAYHLANMFGEDRVHKVVIASSGVNMRKSDNVALLQRAQLEKIEDLMLPATPQHLRNLMTLSVSKRLHMVPDFFLKDFINTLYSENRKEKMELLKGISLGRDDNSSISPLQQEVLIVWGDHDQIFPVRIAHELKKVISKKARLELIKDASHVPQIEKPGEFNNIVLNFLRSSS* 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01290 302 PRINTS Alpha/beta hydrolase fold signature 121 134 IPR000073 -
Rops10g01290 302 PRINTS Alpha/beta hydrolase fold signature 77 92 IPR000073 -
Rops10g01290 302 PRINTS Alpha/beta hydrolase fold signature 243 257 IPR000073 -
Rops10g01290 302 PANTHER SI:DKEY-122A22.2 7 300 - -
Rops10g01290 302 Pfam alpha/beta hydrolase fold 51 287 IPR000073 -
Rops10g01290 302 Gene3D alpha/beta hydrolase 16 301 IPR029058 -
Rops10g01290 302 SUPERFAMILY alpha/beta-Hydrolases 27 299 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01290 Rops-Chr10 25480114 25482163 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01290 239 298 Acyl Lipid Metabolism Gene Families AT3G10840 45.000 6.51e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01290 - - lja:Lj1g3v1788330.1 490.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01290 10 25480114 25482163 Rops10g01290 10 25480114 25482163 ECH