Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01276 ATGGCTGTGTCCTCCTCCACCACCACCACAGTATACATTCCCAGTAAGAACATTCCAATCACACAAGCACCAAAATTTGGATTCTTAACTACCATCAGCTTTCCTGTGAAACCGCGGAGATTATGCATCAGAAACTCCAGTGATGTCTCTGCCGAGACCACTGACACAGAGGTAGATTCAGATAGTTCCATTGAAGTTCCAGAAGAACCTCCATCTTTAATTTCTGCTCTCAACGTGGAAAGGGCTCTCCGTGGCATACCAATTACAGACGCAGATCATTATGGTAGACTCGGCATTCCAAGAGGATGTCCCTTTGACAAGGTGGCGTTTGCATATAATAACAAGGTTCGAGAATTAGAGGGTCAAGGTTTAGAGGAAGATGAACTCAAGAAGCAAATGGAACTTCTCAGAGAATCATACACTATCCTGTCATCGAAAGAAGAAAGAAGAATATATGACTGGAGCTTGGCTAGAACAGAGAATACAGGCAAATACAATTGGCCGTACGAGGTGGACATAAAACAAATCCCAAAAGGAGATCCTCCACCACAGGAACCCGAGGATGTTGGACCAACAAGAATAGTTGGATACTTCATGCTGGGCTGGTTAATGCTCGCGTTCGTGTTATCAATTGCACTAAACTTATAG 648 0.4383 MAVSSSTTTTVYIPSKNIPITQAPKFGFLTTISFPVKPRRLCIRNSSDVSAETTDTEVDSDSSIEVPEEPPSLISALNVERALRGIPITDADHYGRLGIPRGCPFDKVAFAYNNKVRELEGQGLEEDELKKQMELLRESYTILSSKEERRIYDWSLARTENTGKYNWPYEVDIKQIPKGDPPPQEPEDVGPTRIVGYFMLGWLMLAFVLSIALNL* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01276 215 FunFam NAD(P)H-quinone oxidoreductase subunit U chloroplastic 74 165 - -
Rops10g01276 215 SUPERFAMILY Chaperone J-domain 91 158 IPR036869 -
Rops10g01276 215 Gene3D DnaJ domain 87 166 IPR036869 -
Rops10g01276 215 MobiDBLite consensus disorder prediction 47 67 - -
Rops10g01276 215 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT U, CHLOROPLASTIC 1 214 IPR044199 GO:0009535|GO:0010598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01276 K23052 - gmx:100793741 302.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01276 10 25298771 25300772 Rops10g01276 10 25298771 25300772 ECH