Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01274 ATGGCTTCTGCTTCTGTTCCAATAACTTTGCCATTGAGCTCTGCCAGGCTGAACAAGCCATCATCTGAAGCCTTTTTCAGACCATTACCCGTACGACAAGCAAAGAGGACCCTCTTTCCAAAACCACTGTCAAAATCCAAGCTTGGAATTCAAGCATCTTTGAAGGAGAAGGCACTGACAGGACTTACAGCAGCTTCCCTGACTGCTTCCATGGTGATACCAGAGGTGGCTAACGCAGCTGGATCTGATTTCTCCCCATCTCTCAAGAACTTTCTACTCAGCATTTTTTCTGGTGGGGTTGTGCTAATAGCCATATTTGGAGCCGTTATTGGGGTTGCCAACTTTGATCCGGTTAAGAGAACTTGA 366 0.4645 MASASVPITLPLSSARLNKPSSEAFFRPLPVRQAKRTLFPKPLSKSKLGIQASLKEKALTGLTAASLTASMVIPEVANAAGSDFSPSLKNFLLSIFSGGVVLIAIFGAVIGVANFDPVKRT* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01274 121 Pfam Photosystem II reaction centre X protein (PsbX) 85 120 IPR009518 GO:0009523|GO:0015979|GO:0016020
Rops10g01274 121 PANTHER OS07G0673550 PROTEIN 1 121 - -
Rops10g01274 121 Gene3D Single helix bin 84 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01274 Rops-Chr10 25281077 25281729 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01274 - - gmx:100305487 168.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01274 10 25281077 25281729 Rops10g01274 10 25281077 25281729 ECH