Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01268 ATGTCCACTGCATCCCTCAACTCCGAACGAGCCCGGGTCCCACCCGCCATCCCCATGCCCACTCCCCCTCTCGCCAAGTTCAAGATTGGCCTTTGTCAACTCTCAGTCACTCCCGACAAGGACAGGAACATCGCTCATGCTCGCTCCGCCATTCAAGACGCTGCATCTAAGGGTGCCAAGCTCGTTCTTTTGCCCGAAATTTGGAATAGTCCTTATTCCAATGATAGTTTCCCCGTCTACGCCGAGGATATTGATGCTGGTGGCGATGCTTCTCCTTCCACTGCCATGCTCTCTGAACTGTCTCGTCTCTTGAACATCACTGTCGTTGGTGGTTCTATTCCAGAACGTTCTGGGGATAGCTTGTACAACACTTGTTGTGTCTTTGGCACTGATGGGAAGCTCAAAGCCAAGCACCGTAAGATACATCTTTTTGATATTGACATCCCTGGGAAGATTACCTTTATTGAATCAAAAACTCTCACTGCTGGGGAGACTCCAACAATTGTGGACACAGAGGTTGGACGCATTGGCATAGGCATCTGTTATGACATTCGGTTTCCAGAGCTAGCAATGATATATGCAGCAAGAGGTGCTCACTTACTCTGCTATCCTGGGGCATTTAACATGACAACTGGACCATTGCATTGGGAATTATTGCAGAGGGCAAGGGCTACAGACAATCAGTTATATGTGGCAACCTGTTCACCTGCTCGGGATACTGGATCTAGTTATGTTGCTTGGGGTCACTCCACTCTTGTTGGACCATATGGTGAAGTTCTGGCTACTACAGAACATGAGGAGGCAATCATCATAGCAGAAATTGATTATTCAGTAATAGAGCAGAGAAGGACAAATCTCCCTGTAACTAAGCAAAGACGAGGTGATCTTTACCAATTGGTGGATTTTCAGAGGCTGAATTCCCACTGA 927 0.4768 MSTASLNSERARVPPAIPMPTPPLAKFKIGLCQLSVTPDKDRNIAHARSAIQDAASKGAKLVLLPEIWNSPYSNDSFPVYAEDIDAGGDASPSTAMLSELSRLLNITVVGGSIPERSGDSLYNTCCVFGTDGKLKAKHRKIHLFDIDIPGKITFIESKTLTAGETPTIVDTEVGRIGIGICYDIRFPELAMIYAARGAHLLCYPGAFNMTTGPLHWELLQRARATDNQLYVATCSPARDTGSSYVAWGHSTLVGPYGEVLATTEHEEAIIIAEIDYSVIEQRRTNLPVTKQRRGDLYQLVDFQRLNSH* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01268 308 ProSiteProfiles Carbon-nitrogen hydrolase domain profile. 27 276 IPR003010 GO:0006807
Rops10g01268 308 CDD nit 28 293 IPR045254 GO:0016811
Rops10g01268 308 PANTHER NITRILASE-RELATED 9 300 - -
Rops10g01268 308 Pfam Carbon-nitrogen hydrolase 29 282 IPR003010 GO:0006807
Rops10g01268 308 FunFam Omega-amidase chloroplastic 24 302 - -
Rops10g01268 308 Gene3D - 25 302 IPR036526 -
Rops10g01268 308 ProSitePatterns Uncharacterized protein family UPF0012 signature. 177 197 IPR001110 -
Rops10g01268 308 SUPERFAMILY Carbon-nitrogen hydrolase 20 293 IPR036526 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01268 Rops-Chr10 25204762 25209815 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01268 K13566 - gmx:100817195 555.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01268 10 25204762 25209815 Rops10g01268 10 25204762 25209815 ECH