Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01260 ATGGACTTGAGGAACATGGGTTTGGATCCCTCACTGTTGTCAATCAAGGCGGGAGAGATAAAGGTGCAGGTGGAGAACGACAACGTTTTGGTGGTGAGTGGGGAGAGGAAGCGTGAGAAAGACAACAAGGAAGGGGTGAAGTATTTGAGGATGGAGAGAAGGGTTGGCAAGTTCATGAGGAAGTTCTCTCTACCTGATAACGCTAACATGGATGCTATATCGGCGGTTTGTCAGGATGGTGTGCTCACTGTCACCGTAGAGAAGCTTCCACCACCGGAGGCTAAAAGAGGCAAGACCATTGAGGTCAAGAGTGCTTAA 318 0.4937 MDLRNMGLDPSLLSIKAGEIKVQVENDNVLVVSGERKREKDNKEGVKYLRMERRVGKFMRKFSLPDNANMDAISAVCQDGVLTVTVEKLPPPEAKRGKTIEVKSA* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01260 105 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 1 103 IPR002068 -
Rops10g01260 105 CDD ACD_sHsps-like 15 88 - -
Rops10g01260 105 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 15 103 IPR031107 -
Rops10g01260 105 Gene3D - 8 104 IPR008978 -
Rops10g01260 105 Pfam Hsp20/alpha crystallin family 14 103 IPR002068 -
Rops10g01260 105 SUPERFAMILY HSP20-like chaperones 16 96 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01260 Rops-Chr10 25162519 25162836 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01260 K13993 - rcu:8258555 152.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01260 10 25162519 25162836 Rops10g01260 10 25162519 25162836 ECH