Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01256 ATGAAAGAGATAATACAGCCAGCGTATGACACGACGGTGAAGCTGATGCTGGCTTCACTGGAACGCAACTTGCTCCCCGACGCTGTCATCAGGAGACTCACGCGCTTGCTCTTGGCCACTCGCCTTCGCTCTTGTTACAAGCCTTCCTCTGACATTCAACTCTCCGACCTTATCCACTTCGCACATTCTTTACAAGAGATGCCTATTGCTGTCAATACTGATAAGCCCAAATCTCAACATTATGAATTACCAACCTCTTTCTTCAAGCTGGTGCTCGGAAAGAATCTCAAATACAGTGGTTGCTACTTCTCTTCTGCCTCAAAAACACTGGAAGATGCTGAAGAAGCAATGTTGGAACTGTACTGCGAGAGATCAAACCTGAAAGACGGTCATACGGTTCTTGATGTCGGATGCGGTTGGGGGTCACTGGCTTTATATATTGCCAAGAAGTACAGTAATTGCAGGGTTACAGGAATCTGCAATTCCACAACTCAGAAAGCTTATATTGAGGAGAAGTGCATGGATCTTCAACTGCAAAATTTGGACATCATTGTTGCAGATATTAGCACGTTTGAAATGGAAGCTTCTTATGACAGAATATTTTCCATAGAAATGTTTGAGCATATGAAGAACTATAAAGATCTTCTCAAGAAGATATCCAAATGGATGAAAGAGGATGGCCTTTTATTTGTTCACTATTTCTGCCACAAGGCATTTGCCTACCACTTTGAGGACGAAAATGAAGATGACTGGATCACAAGATACTTCTTTACTGGAGGAACTATGCCTTCAGCAAATCTACTTCTTTATTTCCAAGATGATGTTACTGTCATCAACCATTGGCTAGTAAATGGGAAACACTACGCACAGACCAGTGAAGAATGGCTCAAAAGAATGGACCAGAACATAACTTTCATCAAGCCAATTATGGAATCAACGTATGGCAAGGATTCAGCTATCAAGTGGACCGTCTATTGGAGAACATTCTTCATTGCTGTAGCCGAACTTTTTGGATACAATAATGGCGAAGAATGGATGGTTGCACACTTTCTTTTCAAAAAGAAATAA 1068 0.4157 MKEIIQPAYDTTVKLMLASLERNLLPDAVIRRLTRLLLATRLRSCYKPSSDIQLSDLIHFAHSLQEMPIAVNTDKPKSQHYELPTSFFKLVLGKNLKYSGCYFSSASKTLEDAEEAMLELYCERSNLKDGHTVLDVGCGWGSLALYIAKKYSNCRVTGICNSTTQKAYIEEKCMDLQLQNLDIIVADISTFEMEASYDRIFSIEMFEHMKNYKDLLKKISKWMKEDGLLFVHYFCHKAFAYHFEDENEDDWITRYFFTGGTMPSANLLLYFQDDVTVINHWLVNGKHYAQTSEEWLKRMDQNITFIKPIMESTYGKDSAIKWTVYWRTFFIAVAELFGYNNGEEWMVAHFLFKKK* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01256 355 FunFam Cation-transporting ATPase 69 349 - -
Rops10g01256 355 CDD AdoMet_MTases 132 234 - -
Rops10g01256 355 Pfam Mycolic acid cyclopropane synthetase 78 309 - -
Rops10g01256 355 PANTHER - 1 355 - -
Rops10g01256 355 Gene3D Vaccinia Virus protein VP39 71 349 IPR029063 -
Rops10g01256 355 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 78 350 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01256 Rops-Chr10 25133910 25136569 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01256 78 297 Acyl Lipid Metabolism Gene Families AT3G23510 29.778 9.61e-23 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01256 - - gmx:100818389 659.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01256 10 25133910 25136569 Rops10g01256 10 25133910 25136569 ECH