Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01243 ATGGAGGAAGGTTACCTCAGAAGCAAGTTCAAGAGGGTCTGTGTCTTCTGTGGCAGCAACTCTGGCAACAGAGAAGTCTTCAGTGATGCTGCGATTCAATTGGCCAATGAACTGATTAAGCGAAACATAGACTTGGTGTATGGTGGGGGAAGTATTGGGCTAATGGGCTTAATATCACAGAGAGTGTATGATGGAGGCTGCCATGTCCTAGGGATAATTCCAAAAGCTCTCATGCCTCTTGAGATATCTGGTGAAACAGTTGGTGAAGTAAGAATTGTTTCAGATATGCATGAGCGTAAAGCTGCAATGGCTCAAGAAGCTGATGCATTTGTTGCTCTCCCTGGAGGATATGGAACCATGGAAGAGCTGTTGGAGATGATAACATGGGCCCAACTTGGAATTCATAAAAAACCGGTTGGTCTACTGAATGTTGATGGTTATTATAACTGTTTGCTTGCATTATTTGACAATGGTGTTCAAGAAGGCTTCATTAAGCCTGGTGCACGAAATATCGTTGTCTCTGCTCCATCTGCCAAAGAACTTATGATGAAGATGGAGCATTACACTCCCTCGCATGAACATGTCGCCCCTCAAGAGAGCTGGCAGATGAAGCAATTAGGCAATTATCCAGGACAAGAAAATGCAGAGTGA 651 0.4409 MEEGYLRSKFKRVCVFCGSNSGNREVFSDAAIQLANELIKRNIDLVYGGGSIGLMGLISQRVYDGGCHVLGIIPKALMPLEISGETVGEVRIVSDMHERKAAMAQEADAFVALPGGYGTMEELLEMITWAQLGIHKKPVGLLNVDGYYNCLLALFDNGVQEGFIKPGARNIVVSAPSAKELMMKMEHYTPSHEHVAPQESWQMKQLGNYPGQENAE* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01243 216 Pfam Possible lysine decarboxylase 55 185 IPR031100 -
Rops10g01243 216 PANTHER LOG FAMILY PROTEIN YJL055W 7 209 - -
Rops10g01243 216 FunFam Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG8 10 204 - -
Rops10g01243 216 NCBIfam Rossman fold protein, TIGR00730 family 11 188 IPR005269 GO:0009691|GO:0016787
Rops10g01243 216 SUPERFAMILY MCP/YpsA-like 9 188 - -
Rops10g01243 216 Gene3D - 9 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01243 Rops-Chr10 25004871 25007756 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01243 K22522 - gmx:100785484 402.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops9g02043 9 37666254 37668769 Rops10g01243 10 25004871 25007756 PCT