Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01231 ATGACTGAGCCATCTTCCAAAACCAACGGTAACGGCGCAATTAACGGCTCCGCCACCACTAACGGCAATCCAGGGCCAGTGAAATCCCAGCTTTACAACCCAAACCGTCAAATTTACCGGCCGCAATCTAACTACCACCGCCGTCAACGCTCCCACCGCAACCTCTGCTGTTGCTGTTGCTTCTGGACAATCCTGACCCTCCTCGCCGCCGCACTTCTCGCCGCCATTGTCGGCGCCGCACTGTACGTTCTTTACCGTCCTCACCAGCCGGAATTTTCAATCACCAACCTCCGCATTGCGAAAATGAACCTAACTACCTCCAACGACTCACCCTCACATCTCACTACCCTTTTCAACCTCACCCTCATCGCTAAGAACCCCAACAACCACCTCGTATTTTTCTACGACCCTTTCACCGTAACCGCTTTCTCCGATTCTGTTGCCATCGGAAATGGGTCCCTAACGGCTTTCACCTCCGACAAGAACAACCAAACGAGCCTCCGAGCGGTCCTTTCTGGTTCACAAGATCTGGACACTGATTCATTGACTACTCTGAGATCGGGTCTCAAGAGCAAAAAGGGGTTCCCAGTGGAGATTCAGATGGATACTAAGGTGAAGATGAAGATGGAATGGCTGAAGAGCAAGAAGGTAGGAATAAGAGTCACTTGTGACGGAATCAAAGGAACAGTCCCTGCCGGTAAGTCTCCGTCGGTGGCTTCTGTTATTAACTCAGAATGTAAGGTAGATCTTCGAATCAAGATCTGGAAGTTCTCCTTTTAG 780 0.5064 MTEPSSKTNGNGAINGSATTNGNPGPVKSQLYNPNRQIYRPQSNYHRRQRSHRNLCCCCCFWTILTLLAAALLAAIVGAALYVLYRPHQPEFSITNLRIAKMNLTTSNDSPSHLTTLFNLTLIAKNPNNHLVFFYDPFTVTAFSDSVAIGNGSLTAFTSDKNNQTSLRAVLSGSQDLDTDSLTTLRSGLKSKKGFPVEIQMDTKVKMKMEWLKSKKVGIRVTCDGIKGTVPAGKSPSVASVINSECKVDLRIKIWKFSF* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01231 259 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 22 248 - -
Rops10g01231 259 Pfam Late embryogenesis abundant protein 124 223 IPR004864 -
Rops10g01231 259 Gene3D - 83 223 - -
Rops10g01231 259 MobiDBLite consensus disorder prediction 1 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01231 Rops-Chr10 24854879 24856101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01231 24 226 EF-hand Containing Proteins AT5G21130 28.704 1.09e-19 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01231 - - gmx:100786652 452.981