Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01221 ATGGCGGAGGAAGCTCAATATCCATCGACAGACCCCGCGTCCCTAAAACGCAAATACGAAGGCCAACCCACCAGACCCACCGGATTCTCTTCCCCTCCTTCTCCGGCCACCGGCATCGAGCTCGCCAAGCAGCGTGCTCAAGAAGTCGCCGCTCGCCTCCTCAGTGGTGCTCCTCCTCTCGATGTTAAGCGTCCCAAGGCCGACAATGGCGGTCCTCCCTCTGCCTTCGATTCCCTCGATGTGAAGCCTCAATACTCAGCTCCTGTTTCCTATGGGCATCAAGGTACGAGCAAGAAGATTGAAATCCCCAATGGAAGGGTTGGTGTCATTATTGGCAAGAGCGGGGAAACCATCAAGTATCTTCAGTTGCAATCGGGAGCTAAAATTCAAGTTACTCGTGATATGGATGCTGATCCTAATTCTCCAAATAGGATGGTTGAGCTTATGGGTACTCCTGAAGCTATTGCCACTGCTGAGAAACTCATCAACGAAGTTCTTGCTGAGGCTGAAGCGGGGGGTTCTGGCATTATTGCTCGACGACTGACTGGACAAGCTGGGGGAGCTGATGAATTCGCGATGCAAATACCAAATAATAAGGTTGGTCTTATAATTGGTAAAGGAGGAGAAACAATAAAGAATATGCAAGCTTCTACTGGAGCCCGAATTCAGGTGATACCTCTGCATCTTCCCCCAGGTGACCCATCAACAGAAAGAACATTAAAAATTGATGGAACCCCTGAGCAAATTGAGTCTGCAAAGCAGTTGGTCAATCAAGTAATCAGTGGTGAGAATCGTCTCAGAAATCCTGCAATGTCTGGTGGTTATCCTCAGCAAGGTTACCAATCCCGACCACCCTCTAGTTGGGCTCCCCCTGCTGCGCCTGTGCAGCAACCTGGCTATGGCTATGTCCAGCCAGGAGCATACTCTGGTCCATCACCCCAGTATAACATGCCTCAGCCACCATATGCAGGCTATCCTCCCCAGCAATCTGGTGGATATTCCACCAATTGGGACCAGTCAACTGCACCACCTCAGCAGCAGTCTACTCATGCTGGTGGTTATGATTACTATAGTCAACAGCCACAGCAACAGCAAAATCCTGGGGGTCCAGCACCTCCAGCTGATGGGTCTACATACAATTACAATCAACCACCTTCCTATGGTTATAACCAACCAGGACAGGGTTATGGGCAGGACAGCTATGGTGCATATAATGCACCACCACAATCAGGGTATGGTCAGCCACCAACATATGACCAGCAACAAGGCTACGGCTCAGCTCCTAGCTATGGTAGTGGGAGTAATCCAACACAAGAGGGTCACACTGCCAACTATGGATCGCAGGGAGATTCAGCCCCAGCTCCATCAGCCCAACCCTCTGCTGTTGCCCAGCAAGGTTATGCTACCAACCCACAGCCAAGCTCCAACACTGCCAACTATCCACCTCAAGGAACTCCTCAGCCGGGTTATGGAATACCCCCTACCTCCCAAGCAGCTTATGGCAATCAATCACAGGCGGCTTATGGAGCCCCTCAATCTCAAAAGCCAAGTGGCAATCCACCTGTTTATGGGCAGTCACAGTCACCTAGCACAGCAGGAGGCTATGGTCAGTCAGCATATCCCCCTGCCCAGCCCCCACCTTCTGGGTATGCTCAACCAGAATCAGGCCCTCCAAGAGCACCACCATCTGGTTATGGTGGTGCAGTGCAACCAGGGTATGGTCCTCAATCATATGGTGCTCCTCAGGGTGGCCAGCCTGGTTATGGTCAGGCACCACCACCATATGGCAACAGTGCTGGTTATACTCAACCTCCGGTATATGCTAGTGATGGTAATGCCGGTGGGAATAGTCATGGAAGCTATGATGGAGCACCTGCACAGGCTGTTCAGCAGGGTGGTGTTGCTAAAGCGTCACCTCAGAGTTGA 1926 0.5161 MAEEAQYPSTDPASLKRKYEGQPTRPTGFSSPPSPATGIELAKQRAQEVAARLLSGAPPLDVKRPKADNGGPPSAFDSLDVKPQYSAPVSYGHQGTSKKIEIPNGRVGVIIGKSGETIKYLQLQSGAKIQVTRDMDADPNSPNRMVELMGTPEAIATAEKLINEVLAEAEAGGSGIIARRLTGQAGGADEFAMQIPNNKVGLIIGKGGETIKNMQASTGARIQVIPLHLPPGDPSTERTLKIDGTPEQIESAKQLVNQVISGENRLRNPAMSGGYPQQGYQSRPPSSWAPPAAPVQQPGYGYVQPGAYSGPSPQYNMPQPPYAGYPPQQSGGYSTNWDQSTAPPQQQSTHAGGYDYYSQQPQQQQNPGGPAPPADGSTYNYNQPPSYGYNQPGQGYGQDSYGAYNAPPQSGYGQPPTYDQQQGYGSAPSYGSGSNPTQEGHTANYGSQGDSAPAPSAQPSAVAQQGYATNPQPSSNTANYPPQGTPQPGYGIPPTSQAAYGNQSQAAYGAPQSQKPSGNPPVYGQSQSPSTAGGYGQSAYPPAQPPPSGYAQPESGPPRAPPSGYGGAVQPGYGPQSYGAPQGGQPGYGQAPPPYGNSAGYTQPPVYASDGNAGGNSHGSYDGAPAQAVQQGGVAKASPQS* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01221 641 MobiDBLite consensus disorder prediction 328 537 - -
Rops10g01221 641 Pfam KH domain 193 257 IPR004088 GO:0003723
Rops10g01221 641 Pfam KH domain 98 164 IPR004088 GO:0003723
Rops10g01221 641 MobiDBLite consensus disorder prediction 1 81 - -
Rops10g01221 641 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 96 173 IPR036612 GO:0003723
Rops10g01221 641 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 89 430 - -
Rops10g01221 641 SMART kh_6 94 167 IPR004087 GO:0003676
Rops10g01221 641 SMART kh_6 187 261 IPR004087 GO:0003676
Rops10g01221 641 FunFam KH domain-containing protein 183 284 - -
Rops10g01221 641 ProSiteProfiles Type-1 KH domain profile. 188 256 - -
Rops10g01221 641 MobiDBLite consensus disorder prediction 540 560 - -
Rops10g01221 641 MobiDBLite consensus disorder prediction 602 616 - -
Rops10g01221 641 ProSiteProfiles Type-1 KH domain profile. 95 162 - -
Rops10g01221 641 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 192 263 IPR036612 GO:0003723
Rops10g01221 641 MobiDBLite consensus disorder prediction 266 641 - -
Rops10g01221 641 Gene3D K Homology domain, type 1 90 184 IPR036612 GO:0003723
Rops10g01221 641 Gene3D K Homology domain, type 1 185 285 IPR036612 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01221 Rops-Chr10 24730384 24735771 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01221 K13210 - gmx:100813135 825.469
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01221 10 24730384 24735771 Rops10g01221 10 24730384 24735771 ECH