Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01191 ATGGCACCTTTGTTTGATTGGGGTGTGAAAGAGAGTCATAGAGGAACCCCAGTGGTGGTGAAGATGGAGAATCCAAATTGGTCCATGGTTGAACTTGAGGGTCCTTCAGAGGAAGATTTGCTCATCACTGACCCTTCTGGTGCTCCAAGAGAAAAAGGAAGAGGAAAAAACGCTAAGCAACTCACTTGGGTTCTTCTTCTTAAAGCTCATAGAGCTGCGGGTTGTTTAACCTCCATTGCCCCTGCATTGTCGAGCCTGGTCTCAGCCGTCAAGCGACGCGTGGCTTCTGGAAGAACAGATGCTGACGTGGACCACGATGGTGGTGGGAGGGAGAAGGAGAACCCTACAGTGAAGAGCAGGTTTTATTCGTGTATTAAAGTGTTTCTTTGGATGTCTGTGTTTCTGTTGTGTTTTGAGGTTGCTGCATACTTTAAAGGTTGGCATTTTGGTGCTCCACATCTTCAGTTGGAGAAGTATTTGTCGTGGACACCAGCATTTGGAGTTAAGGATTTTTTCGGTTGGATTTATGCTCAGTGGGTTTTGATTCGGGTGGAATACCTTGCTCCTCCTCTTCAATTCCTTGCCAGTGCGTGTATTGTGTTGTTCCTTATTCAGAGTTTGGATAGGTTGGTTCTTTGTTTAGGTTGTTTTTGGATCCGATTTAAGAAAATTAAACCTGTTCCAAAAGGTGGTGATGTAGATCTTGAATCTGGAGAGAAGGGTTTTTTCCCTATGGTACTAGTTCAGATCCCCATGTGCAATGAGAAAGAGGTTTATCAGCAATCGATTGCTGCTGTTTGTAATTTGGATTGGCCCAAGTCTAAGTTGCTAATTCAAGTTCTTGATGATTCGGATGACCCAACAACACAGTTGCTGATCAAGGAGGAGGTTCAAAAATGGCAACAAGAGGGTGCCGACATTTTGTACCGGCACCGGGTAATCAGAGATGGGTACAAGGCTGGTAATCTGAAATCTGCCATGAATTGTAGCTATGTGAAAGACTACGAGTTCGTTGCAATTTTTGATGCTGATTTTCAGCCCACTCCTGATTTCCTTAAAAAAACCGTTCCTCATTTTGAGGATAATGACGAATTAGGGCTTGTTCAAGCTAGATGGTCCTTTGTGAACAAGGATGAGAACCTGCTAACAAGGTTGCAGAACATTAATCTGTCTTTCCATTTTGAGGTAGAACAGCAAGTCAATGGTGTTTTCATTAATTTCTTTGGTTTCAATGGAACGGCTGGAGTGTGGAGAATAAAGGCTTTGGAGCAAGCTGGTGGTTGGTTGGAGAGGACCACTGTAGAGGACATGGACATCGCTGTTCGAGCTCATCTTCATGGCTGGAAATTCGTTTTCCTCAATGATGTTGAGTGCCAGTGTGAGCTACCCGAATCTTATGAAGCTTATAGGAAACAGCAGCATAGATGGCATTCTGGGCCAATGCAATTGTTTCGCCTTTGTTTGCCTGATATCATACGGTCCAAGATAAGCGTATGGAAGAAATTCAATTTGATATTCCTCTTCTTTCTTCTTAGGAAGCTGATATTACCATTCTATTCATTCACCTTGTTTTGTATAATTCTTCCTATGACAATGTTCGTACCAGAAGCTGAACTTCCTGCATGGGTTGTTTGTTATATCCCCGCTACCATGTCATTCCTCAACATTCTTCCAGCTCCAAAAGCTTTCCCATTTATTGTTCCTTATCTCCTATTTGAGAATACCATGTCAGTTACCAAATTCAATGCCATGATATCTGGCCTATTCCAGCTTGGTAGTGCGTACGAGTGGGTGGTCACTAAGAAATCTGGTCGTTCCTCAGAGGGTGATTTGGTTTCATTGATTGAGAAACCAAAGCATCAAAGAGGGGCATCAGCACCTGATCTCGAGGAAATGAAAGAGGAATATCGAAGGAAGGAGCAAAAGGAATCTAAGAAGAAGAAAAAGCATAACAGAATATATATGAAGGAGCTTGCTTTGGCCTTTTTACTTCTAACAGCCTCAGCAAGGAGTCTCCTTTCTGCTCAGGGGATACACTTCTACTTTCTACTATTTCAGGGTATATCATTCCTGTTGGTCGGTCTTGACTTGATTGGTGAACAGGTGGATTGA 2112 0.4299 MAPLFDWGVKESHRGTPVVVKMENPNWSMVELEGPSEEDLLITDPSGAPREKGRGKNAKQLTWVLLLKAHRAAGCLTSIAPALSSLVSAVKRRVASGRTDADVDHDGGGREKENPTVKSRFYSCIKVFLWMSVFLLCFEVAAYFKGWHFGAPHLQLEKYLSWTPAFGVKDFFGWIYAQWVLIRVEYLAPPLQFLASACIVLFLIQSLDRLVLCLGCFWIRFKKIKPVPKGGDVDLESGEKGFFPMVLVQIPMCNEKEVYQQSIAAVCNLDWPKSKLLIQVLDDSDDPTTQLLIKEEVQKWQQEGADILYRHRVIRDGYKAGNLKSAMNCSYVKDYEFVAIFDADFQPTPDFLKKTVPHFEDNDELGLVQARWSFVNKDENLLTRLQNINLSFHFEVEQQVNGVFINFFGFNGTAGVWRIKALEQAGGWLERTTVEDMDIAVRAHLHGWKFVFLNDVECQCELPESYEAYRKQQHRWHSGPMQLFRLCLPDIIRSKISVWKKFNLIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAELPAWVVCYIPATMSFLNILPAPKAFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLVSLIEKPKHQRGASAPDLEEMKEEYRRKEQKESKKKKKHNRIYMKELALAFLLLTASARSLLSAQGIHFYFLLFQGISFLLVGLDLIGEQVD* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01191 703 MobiDBLite consensus disorder prediction 619 648 - -
Rops10g01191 703 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 237 461 IPR029044 -
Rops10g01191 703 Pfam Glycosyl transferase family group 2 338 544 IPR001173 -
Rops10g01191 703 SUPERFAMILY Nucleotide-diphospho-sugar transferases 246 523 IPR029044 -
Rops10g01191 703 MobiDBLite consensus disorder prediction 619 641 - -
Rops10g01191 703 Coils Coil 629 649 - -
Rops10g01191 703 FunFam probable xyloglucan glycosyltransferase 5 237 462 - -
Rops10g01191 703 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 178 700 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01191 Rops-Chr10 24273003 24276624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01191 1 703 Miscellaneous Gene Families AT4G07960 78.631 0.0 1090
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01191 - - gmx:100818436 1213.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01191 10 24273003 24276624 Rops10g01191 10 24273003 24276624 ECH