Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01178 ATGAAGGTACAAGGTCTCAAGATTGGTGTTGCCAGAGTCATAGTGCATGTGATGCTGTCACTGCTGTGCACATGTGGGGCAAGCACAATCCATCCTTTGATTCTAATACCTGGGAACGGAGGGAACCAACTAGAAGGCAGGCTCACCACTCACTACAAGCCCTCCACCTTCATCTGTGACACTTACCCTCTTTTCAAAAAACATAATGGTTGGTTCAGGCTCTGGTTTGATTCCACCGTCCTACTTGCTCCTTTCACTCAATGCTTTGCTGAGCGCATGACTCTTCACTACAATCCACACCTCGATGATTTCTTCAATGCCCCTGGAGTTGAGACTCGGGTCCCTCATTTTGGTTCCACTTCCTCCCTCCTTTATCTCAATCCTCGTCTCAAGCATGTCACTGAATACATGGCATCCCTGGTAGATTCATTAGAACAACTTGGTTATATTGATGGTGAAACTCTATTTGGAGCTCCCTATGATTTTCGATATGGTCTAGCAGCTCAAGGTCACCCATCTCAAGTGGGCTCCAAGTTCCTCAAAGATCTTGAGAGTTTAATAGAAGAAGCAAGCAATTCCAACGGTGGGAAGCCAGTAATACTTGTCTCACACAGTTTAGGAGGTCTATTTGTTCTCCAACTCCTGAATAGAAACCCCTCTTCCTGGCGCAAGAAATTCATTAAACACTTCATTGCTCTTTCTGCCCCATGGGGTGGTGCTGTAGATGAAATGTTCACTTTTGCTTCTGGTAATACCCTTGGAGTGCCCCTAGTTAACCCCTTGATAGTGAGAGATGAACAGAGAAGCTCTGAGAGCAACCTATGGCTTTTGCCCAATCCCAAGGTATTTGATCTTCAAAAACCATTGGTGATCACTCCAACTAAAAGCTATTCAGCACATGACATGGCTGATTTTCTCAAAGACATTGGTTTTCCTGAAGGGGTGAATCCTTATGAAACTCGCATTCTACCCTTGATAGAGAATGTAGAAGCACCAGAAGTGCCTATAACTTGTATTATAGGGACAGGCGTAAGTACTCTAGAGACTTTGTTTTATAGGAACGGTGATTTTGATCAAAGACCAGAAATTTCATATGGGGATGGTGATGGAACGGTGAACATGGCGAGCTTGTTGGCATTGCAGTCGCTATGGAAAGATGAGAAAAATCAGTACCTGAAAGTGATTAAGATTGATGGGGTGTCTCATACTTCAATACTGAAAGATGAAGTTGCACTTGATGAAATAATAGGTGAGATTAGTATAATTAATTCTCATATTGAGCTTGGTTTAAGCAGTACTTTTTGTGGATAA 1311 0.4302 MKVQGLKIGVARVIVHVMLSLLCTCGASTIHPLILIPGNGGNQLEGRLTTHYKPSTFICDTYPLFKKHNGWFRLWFDSTVLLAPFTQCFAERMTLHYNPHLDDFFNAPGVETRVPHFGSTSSLLYLNPRLKHVTEYMASLVDSLEQLGYIDGETLFGAPYDFRYGLAAQGHPSQVGSKFLKDLESLIEEASNSNGGKPVILVSHSLGGLFVLQLLNRNPSSWRKKFIKHFIALSAPWGGAVDEMFTFASGNTLGVPLVNPLIVRDEQRSSESNLWLLPNPKVFDLQKPLVITPTKSYSAHDMADFLKDIGFPEGVNPYETRILPLIENVEAPEVPITCIIGTGVSTLETLFYRNGDFDQRPEISYGDGDGTVNMASLLALQSLWKDEKNQYLKVIKIDGVSHTSILKDEVALDEIIGEISIINSHIELGLSSTFCG* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01178 436 SUPERFAMILY alpha/beta-Hydrolases 31 413 IPR029058 -
Rops10g01178 436 Gene3D alpha/beta hydrolase 325 421 IPR029058 -
Rops10g01178 436 Gene3D alpha/beta hydrolase 79 256 IPR029058 -
Rops10g01178 436 Pfam Lecithin:cholesterol acyltransferase 72 280 IPR003386 GO:0006629|GO:0008374
Rops10g01178 436 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 31 421 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01178 10 423 Acyl Lipid Metabolism Gene Families AT1G27480 61.962 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01178 - - gmx:100804027 748.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01178 10 24011718 24013329 Rops10g01178 10 24011718 24013329 ECH