Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01173 ATGACCGTTTTGATTCCAACTATCCTTGTTCCTCAAATGGGTGGAGGCGATGCTGAGAAGGCCAAGGTGATACAAACTCTATTGTTATATTCTGGATTAAGCACATTATTTCAAAGTTGGTTTGGAACCCGTTTGCCAACTGTAATTGTTGGTTCATACACTTACTTAATACCCACAATTTCAATTGTCCAAGCCAGCAGATTCAAGTCATATACAGATCCTTATGAGAGGTTCACTCATACAATGAGAGGGATACAAGGTGCCATGATCATAAGTGGAAGTTTCCAGATAGTTATGGGATTCTTTGGCTTTTGGAGGAGTACGGCCAGGTTCCTTAGCCCACTTTCTGTAGTCCCTTATGTAACTTTCACTGGACTCGGTCTCTACCATCTCGGTTTCCCAATGCTGGCAAAATGTGTTGAAATTGGACTTCCAGCACTGATTGTTTTTGTTTTCATCTCACAGTATCTCAATCGTTTTATAAAAACCAAGAAGCCAATATTGGACCGATTTGCTGTGCTGTTTTCCATTGCAAGTGTATGGTTACTTGCAGAGCTTCTGACTTCAACCTCTGTATACAACAAGAAGCCAGAAAGTACACAGACTAGTTGCCGCACTGATCGTGCTGGTCTTATTAGTGCTGCTCCATGGGTATATGCTCCTTCCCCCTTCCAATGGGGGAATCCTACCTTCAACTATGGGGAAGCTTTTGCCATGATAGCTGCTTCTTTTGTTTCTCTTTTTGAGTCTACTGGTACATTTTATGCTGCGGCAAGATATGGAAGTGCAACACCAGTTCCACCTTCTATTATCAGCCGTGGAATTGGCTGGGTGGGGTTTGGTTCTTTGCTCAATGCTTTGTGTGGTTCTCTAACTGGATGTACGGCATCAGTGGAAAATGCTGGATTATTAGCATTGACAAGAGTGGGAAGCCGAAGAGTCATCCAAATATCAGCTGGTTTTATGATTTTCTTCTCTATATTTGGAAAAGTTGGAGCACTTTTTGCTTCTGTACCTTTGCCAATCATGGCAGCATTATACTGTGTATTCTTCGGCTATGTGTCTTCTGCGGGTCTTGGTTTTCTCCAGTTCTGCAACCTCAACAGTTTCAGAACCAAATTCGTGTTGGGCTTCTCATTCTTCCTCGGCATCTCCATACCACAATATTTCATTGAATATTACAAAGTAAAGCATTATCATGCAGGTTCTGGATGGTTCAATGATATCGTGATTGTCATCTTCTCATCACACACAATGGTGGCTGCCTTTGTTGCTCTCATTTTGGATATCACACTCTCTCATGAAAATGATGAAGCAGCCCGTAAGGACAGTGGTTTGCAGTGGTGGGAGAAGTTCGTTTTTTATCAGGCTGATGTTAGGAACAATGAATTCTATGCGTTACCAGGCACCCTCGATTGTTGTTTCCAAGCCCATTAA 1437 0.4231 MTVLIPTILVPQMGGGDAEKAKVIQTLLLYSGLSTLFQSWFGTRLPTVIVGSYTYLIPTISIVQASRFKSYTDPYERFTHTMRGIQGAMIISGSFQIVMGFFGFWRSTARFLSPLSVVPYVTFTGLGLYHLGFPMLAKCVEIGLPALIVFVFISQYLNRFIKTKKPILDRFAVLFSIASVWLLAELLTSTSVYNKKPESTQTSCRTDRAGLISAAPWVYAPSPFQWGNPTFNYGEAFAMIAASFVSLFESTGTFYAAARYGSATPVPPSIISRGIGWVGFGSLLNALCGSLTGCTASVENAGLLALTRVGSRRVIQISAGFMIFFSIFGKVGALFASVPLPIMAALYCVFFGYVSSAGLGFLQFCNLNSFRTKFVLGFSFFLGISIPQYFIEYYKVKHYHAGSGWFNDIVIVIFSSHTMVAAFVALILDITLSHENDEAARKDSGLQWWEKFVFYQADVRNNEFYALPGTLDCCFQAH* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01173 478 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 2 475 - -
Rops10g01173 478 NCBIfam purine/pyrimidine permease 17 386 - -
Rops10g01173 478 Pfam Permease family 2 390 IPR006043 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01173 Rops-Chr10 23902894 23906944 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01173 1 478 Organic Solute Cotransporters AT1G65550 61.554 0.0 633
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01173 - - gmx:100801755 734.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01173 10 23902894 23906944 Rops10g01173 10 23902894 23906944 ECH