Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01171 ATGGTGTTTGGGCAAGTAGTAATTGGTCCTCCTGGCTCTGGCAAAACAACTTACTGCAATGGCATGTCTCAGTTCCTCAATCTTATTGGAAGGAAGGTTGCTGTTATCAATTTGGATCCTGCTAATGATTCATTACCCTATGAATGTGCTGTGAACATTGAAGATCTCGTGAAACTTAGTGATGTAATGTTGGAACATTCTCTTGGTCCAAATGGGGGTCTTGTGTATTGTATGGATTATCTGGAGAAAAATATTGATTGGCTGGAAGCAAAATTGGAACCTCTTCTGAAAGATCACTACCTACTCTTTGATTTTCCTGGCCAAGTGGAACTCTTTTTTCTTCATTCAAATGCCAAGAATGTCATCATGAAACTCATGAAGAAATTGAACCTAAGGTTAACTGCAGTGCATTTGGTTGATGCCCATCTTTGCAGTGACCCTGGGAAGTATATTAGTGCATTGCTTCTATCCTTGTCCACAACGCTACATCTAGAACTCCCCCACATCAATGTCTTGTCAAAAATTGATTTGATTGAGAGCTATGGGAGGCTAGCCTTTAACCTTGATTTCTATACAGACGTGCAAGACTTGTCATATTTACAATACCATCTTGATCAGGATCCTCGCTCTGCTAAGTATAGAAAGCTCACGAAGGAATTGTGTGAAGTTATTGAAAACTTCAGTCTTGTGAATTTTACAACCTTAGATATTCAGGACAAAGAGAGTGTAGGGAATTTAGTGAAGCTGATAGACAAAAGCAATGGATACATATTTGCTGGCATAGAAGCAAGTGCAGTTGAATTTAGCAAGATTGCAGTCGGTCCTCTTGATTGGGATTATTATAGATATCCTTCAGTGCAAGAAAAGTACATGAAGGATGATGAAAAAATTGATTATGATGATTGA 906 0.3863 MVFGQVVIGPPGSGKTTYCNGMSQFLNLIGRKVAVINLDPANDSLPYECAVNIEDLVKLSDVMLEHSLGPNGGLVYCMDYLEKNIDWLEAKLEPLLKDHYLLFDFPGQVELFFLHSNAKNVIMKLMKKLNLRLTAVHLVDAHLCSDPGKYISALLLSLSTTLHLELPHINVLSKIDLIESYGRLAFNLDFYTDVQDLSYLQYHLDQDPRSAKYRKLTKELCEVIENFSLVNFTTLDIQDKESVGNLVKLIDKSNGYIFAGIEASAVEFSKIAVGPLDWDYYRYPSVQEKYMKDDEKIDYDD* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01171 301 Gene3D - 4 264 IPR027417 -
Rops10g01171 301 FunFam GPN-loop GTPase 2 4 265 - -
Rops10g01171 301 PANTHER XPA-BINDING PROTEIN 1-RELATED 1 262 IPR004130 -
Rops10g01171 301 Pfam Conserved hypothetical ATP binding protein 7 255 IPR004130 -
Rops10g01171 301 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 255 IPR027417 -
Rops10g01171 301 CDD GPN2 3 252 IPR030231 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01171 Rops-Chr10 23883071 23889472 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01171 K24104 - jre:109012376 564.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01171 10 23883071 23889472 Rops10g01171 10 23883071 23889472 ECH