Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01149 ATGGCGTCGAGTTTTGATCGATGGGAAAAAGATCCTTACTTTAACGCGGCCGAAGAAGTTCAGGAATCTGCAGACAGGATGGAATCTACGTATAGGACATGGATTCACGCAAAGAAGGCTGCGTCTAGTCCCTGGAACTGTGATGATCTCCGCAGAGATCTACATACTGCCCTTGGCACTGCTAAATGGCAGTTAGATGAATTTGTACGGGCGGTCAGGTCAAGTTATAGCAATAGCTCAAGTGAGGATGCAAGAAACAGGCACCAAGATTTTATTGTTGCCATTGGTGACAAGATTTCAAAAGTTGAGCATTTGTTGCAAGATTCTGTTCATTTAGGTAGCAAGGTGTCTCTGCCTTGGGTGTGTCTAGATGAAGGAGAAAGAAATGAGCTTGCATTGTTTCTTTCGGGAATGCCGGCTGCTGCTGGAGGCAAAAATTCCGTTAAATTTATCAGCAGAGACAGTGAAAATCCACAATTAAGTGATAAAGATTTGCTTAGCAATTATTCGGGCAATTTACAAGTTCCACCTGGGCAGGGTTCCTCCGAAGCAGTGGAGGAGAAATCACATGGGCATCGCAGGGCCGCGAGTGCTGATGCTGATATTAGTTCTTGGAAAATTGCTGTTTCCGATGATGTGCAACAATCAAGTTCCTCCAATGGTTCTTATGTTCCTGTGCATAAGGTAGCCAGTCTCTCTAGATTTCTTAGTCCCATGGAATCCCTCTCTAAGTTGAAGTGGCCCAAGAATGGTTATAGAAAGCTGAAAGCAGTGAATCATCATCAAGAAACTGATAATGCACTACTACCATCGACTGAATTAAATGAGGGCATCAATGCATGCTATGAAAGAAGTAAGAGTTGCTTTGATAGTTGTGATGAATCTTATGATAAGCAACTCCATGGTTGGTATGGAGCTATCCAAAGACAGCTTCAAAGATCTCAATACCAAATGCAATACAATAGGCATGTTCAAATAACTGTCTGGATTGTTATTCTCCTTTGTTTGATCGTTTTAATTGCTTTTTACGCAACGTAG 1038 0.4229 MASSFDRWEKDPYFNAAEEVQESADRMESTYRTWIHAKKAASSPWNCDDLRRDLHTALGTAKWQLDEFVRAVRSSYSNSSSEDARNRHQDFIVAIGDKISKVEHLLQDSVHLGSKVSLPWVCLDEGERNELALFLSGMPAAAGGKNSVKFISRDSENPQLSDKDLLSNYSGNLQVPPGQGSSEAVEEKSHGHRRAASADADISSWKIAVSDDVQQSSSSNGSYVPVHKVASLSRFLSPMESLSKLKWPKNGYRKLKAVNHHQETDNALLPSTELNEGINACYERSKSCFDSCDESYDKQLHGWYGAIQRQLQRSQYQMQYNRHVQITVWIVILLCLIVLIAFYAT* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01149 345 FunFam Syntaxin 10 8 109 - -
Rops10g01149 345 Pfam Syntaxin 6, N-terminal 11 103 IPR015260 GO:0016020|GO:0048193
Rops10g01149 345 CDD SNARE_NTD_STX6-like 11 103 - -
Rops10g01149 345 MobiDBLite consensus disorder prediction 175 197 - -
Rops10g01149 345 SUPERFAMILY t-snare proteins 10 107 IPR010989 GO:0016020|GO:0016192
Rops10g01149 345 Gene3D - 9 110 - -
Rops10g01149 345 PANTHER OS05G0443700 PROTEIN 1 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01149 Rops-Chr10 23668585 23671575 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01149 - - gmx:100795867 447.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01149 10 23668585 23671575 Rops10g01149 10 23668585 23671575 ECH