Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01147 ATGAACACGCTCTGCCTCGGCAACAGAGCCACCGCCATCGTGGAAACGTCAGGCTTCCGTCATCGAAAAACAAAGGCGTGGCGCCACAACCCAACGACCGCTTGGGAGATTAAATTTACGAGAAGCACCACTGCGTGTGACTCGAAACCTTCAAAAACAAAGACGAAGCAGCTGGAGCCTATGACATCGCCGCATAGAGGCTCCACAGCAAAGACGCCATCACCAACTTCAAGCCACTCGCCGACGTCAGAAACGATTCACACAAAACCGACTTTCTCAACTCGCATTGGACAATCGCACCACAACACAACACCAACGAAGAAATTGGAGGAAAATGAAGCGCCGCCAAGCTTCCAGAATGTGGCACTGGTGATCGGCGTGACTGGCATTGTGGGCAACAGCCTAGCTGAGATTCTTCCTCTGGCCGACACTCCTGGTGGACGATGGAAGGTCTACGGCGTTGCACGGCGGCCCCGACCGTCGTGGAACGCCGATCACTCCATCGAATACATCCAGTGTGATGTCTCCGATCCCGACGATGCTCAAGCCAAGCTTTCAGGTTTGACAGACGTTACCCACATCTTCTATGTGGGTTGGTCCAACCGACCCACCGAGGCTGAGAACTGCGAGGTTAACGGTGACATGCTAAGGAATGTCCTACGCGCCGTCATCCCAAACGCTCCCAATCTCCGCCACGTGTCACTTCAGACGGGTGGCAAGTACTACGTGGGTCCCTTCGAGCTTATAGGGAAGATCAAGTGCCACAAGCCGCCGTTCACGGAGGATCTGCCACGCCTGGACGCACCCAATTTCTATTACACACAGGAAGGTATCTTGTTCGAAGAGACAGAAAAGAAAGAGGGTTTGACATGGTCAGTTCACAGACCACTAGCCATCTTCGGGTTCTCCCCTTATAGCTTGATGAACTTTGTGGGGACGCTGTGCGTTTATGCTGCTATTTGCAAGCATGAGGGTGTTCCCTTGAGATTTCCCGGCACCAAGGAAGCCTGGGAATCTTATTTTGCAGCTTCAGATGCGGATTTGATTGCGGAGCAGCACATATGGGCCGCAGTGGATCCTTATGCGAGGAACGAGGCCTTCAACTGCAGCAACGGAGATGTGTTCAGGTGGAAGCATCTTTGGAAGGTTTTGGCTGAACAGTTTGGGATTGAGGATTATGGGTTTGAGGAAGGTTCAAATTTGAGGTTGTCGGAGCTGATGAAGAACAAGGGCCCTGTCTGGGATGAGATTGTGAGGGAGAACCAGCTTCACCCTACGAAGCTTGAAGATGTTGGTGAGTGGTGGTTTGCAGATTTTGTATTAGGATTGGAAGGCTTTTTAGATAGCATGAACAAGGCCAAAGAGCATGGCTTTTTGGGATTCAGGAACACCAAAAATTCCTTCATAACTTGGATAGATAAGACCAAAGCTTACAAGATTGTGCCTTGA 1449 0.5114 MNTLCLGNRATAIVETSGFRHRKTKAWRHNPTTAWEIKFTRSTTACDSKPSKTKTKQLEPMTSPHRGSTAKTPSPTSSHSPTSETIHTKPTFSTRIGQSHHNTTPTKKLEENEAPPSFQNVALVIGVTGIVGNSLAEILPLADTPGGRWKVYGVARRPRPSWNADHSIEYIQCDVSDPDDAQAKLSGLTDVTHIFYVGWSNRPTEAENCEVNGDMLRNVLRAVIPNAPNLRHVSLQTGGKYYVGPFELIGKIKCHKPPFTEDLPRLDAPNFYYTQEGILFEETEKKEGLTWSVHRPLAIFGFSPYSLMNFVGTLCVYAAICKHEGVPLRFPGTKEAWESYFAASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFRWKHLWKVLAEQFGIEDYGFEEGSNLRLSELMKNKGPVWDEIVRENQLHPTKLEDVGEWWFADFVLGLEGFLDSMNKAKEHGFLGFRNTKNSFITWIDKTKAYKIVP* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01147 482 CDD 5beta-POR_like_SDR_a 121 442 - -
Rops10g01147 482 FunFam Iridoid synthase 118 482 - -
Rops10g01147 482 Gene3D - 119 482 - -
Rops10g01147 482 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 121 394 IPR036291 -
Rops10g01147 482 MobiDBLite consensus disorder prediction 43 114 - -
Rops10g01147 482 PANTHER 3-OXO-DELTA(4,5)-STEROID 5-BETA-REDUCTASE 118 482 - -
Rops10g01147 482 MobiDBLite consensus disorder prediction 43 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01147 Rops-Chr10 23655688 23657733 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01147 K22419 - gmx:100813467 667.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01147 10 23655688 23657733 Rops10g01147 10 23655688 23657733 ECH