Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01145 ATGGATTCCAAAATGATGAAAAGAAGAGTGACCCCTATTCCCAAAACTCCTTATAACACCAGCGATGATATGACCGAAAAGTCTCAGGATCAGGTTTGCAGCAGCCCTTGTTGTTTCTTTTGCACCATGAGAGAACCAGATGCATCTCTTAGAAGGGCTAGAATAGCGAGCTGCTTCAAAGAAATACCTCTGAGAGAGAATCAAGAACATATCTTGGTGCTGAGTGGACTATGGCATATCGCTATGAGCCAACCCAATGACCCAGAGTTCCCTTCCCTAGGCATATTCAAGTGCATGGCAAATCTAATCTACAAAGGTATAAAAGACAGGAACTGGCTTCTCACAAATCAAAATATATACATGCCCTATTATGCTGCTCATATTATTGGCTCTTACACCATGAATAAGGAAGAGTTTGCACAAATAGCTGTGCAATCAGGTGTTATACCACCACTATTGGAGCTGCTGAGTGGTAAGATCAGTTGGGTTGAGCAAAGAGTCGCTGTTCGAGCACTTGGTCACTTGGCCAGTTACAATAGTACCTTTGAATCAGTAGCAGAGTACGAACAAGAGGTGGTGAAATTGGCCTTGAACTTGGCTTCCACTTGCTTAGAAGTTGTCTATGTCGACTTTGTAGGGGTGAAGGATGTGAACAAAAGAATCCAATACCATAAGAACTTGCTGACAAGAGGTGTTGGGGATTTGGAGATGGAGAATCGCAAGGCTGAGGAATGGGCTAGTCAACTTCAGTGTTGGTCTCTTTATCTGCTGAATTGCTTTGCTTGCAAAGAAAGGTCTTTTAATCTCATCTGTAAAATGAAGTTCCTGAAGGACTTGTGTGATATGTGGGGTGGATTGATAAATCACACGTCACCATCTGGGGTTGGACTTATTAGAATCCTGTGTTATAGTAAAGTAGGAAGAAAAAACATTGCTGAGTCGCCAAAAGTTATAAAGACTCTTGGTAACCTTTCAAGATCTTCAGATGATTGGCAATACATGGGTATCGATTGTCTTGTAATGCTTCTCAAGGACAAAGATACAAGGTACAAAGTTATTGATATTGCCACTTCATACCTCGTTGATTTGATTGAACTTAGAAGCCTTGGAGATAAATCAAACGTAGGTGAGACCATCACAAAGGTGCTCCTTCTGGAACATAATCATAGTAAATTGAAATCCAACAGACAAAAAAGTGAAAAAGCCTTACAACAAGTGCTGGATTTGAAGGTGGATAGGAGGAATAAGGAGAAACTAATGTCAGAAGAAAAATTAGAGGAAACAAGGGTTTTGGTGAGTTTGATAAAGCAGCAAGCGAATCAAATGTTCAGGTTGGGAAAAGTAGAAGAAGCTTTATTCAAATATTCTGAAGCACTTGATGTTTGCCCTTTGAGGTTTAGAAAAGAAAGAATGATACTTTATAGTAACAAAGCACAATGTCACCTGCTACTGAAAAACCCAGATTCAGCCATCAGTGACTCAACTAGTGCTCTTTGTCTCTCCAACCCAGCAAACACACACAGCAAAAGCCTTTGGAGGAGGTCACAGGCTTATGACATGAAAGGAATGGCCAAAGAGAGCCTTATGGATTGCATGATGTTCATGAACGGTTGCATCAAATCTGAAGAGACCAAACGTGTCAAGATTCCATACCATGCCGCACGGATGATCAGCAAACAAATGGAAGTTACATGGCTCTTTGCCACTGCACGCTCAAAGGTAACAACACACAAGACTCTAGTGGTAGAAAAGACAGAAGAATCTAACCAAATTGATGAGGATGAGGATGAGGGCAACTATGAAGAGCTACCCCATGATCATAAAACACTGATGAAGATGATGGAAAAGAGAGGTCACATGCCCGGTCTGTCTACCATTATTGAAGAGCCTTTTCACACTAACAAAGCTGATAGGAGAAAGATGGAAAGGGAAAGAAGGAGATTAAAGAAAGCTGTTGTAGCTCGATCAAAGTAA 1974 0.4103 MDSKMMKRRVTPIPKTPYNTSDDMTEKSQDQVCSSPCCFFCTMREPDASLRRARIASCFKEIPLRENQEHILVLSGLWHIAMSQPNDPEFPSLGIFKCMANLIYKGIKDRNWLLTNQNIYMPYYAAHIIGSYTMNKEEFAQIAVQSGVIPPLLELLSGKISWVEQRVAVRALGHLASYNSTFESVAEYEQEVVKLALNLASTCLEVVYVDFVGVKDVNKRIQYHKNLLTRGVGDLEMENRKAEEWASQLQCWSLYLLNCFACKERSFNLICKMKFLKDLCDMWGGLINHTSPSGVGLIRILCYSKVGRKNIAESPKVIKTLGNLSRSSDDWQYMGIDCLVMLLKDKDTRYKVIDIATSYLVDLIELRSLGDKSNVGETITKVLLLEHNHSKLKSNRQKSEKALQQVLDLKVDRRNKEKLMSEEKLEETRVLVSLIKQQANQMFRLGKVEEALFKYSEALDVCPLRFRKERMILYSNKAQCHLLLKNPDSAISDSTSALCLSNPANTHSKSLWRRSQAYDMKGMAKESLMDCMMFMNGCIKSEETKRVKIPYHAARMISKQMEVTWLFATARSKVTTHKTLVVEKTEESNQIDEDEDEGNYEELPHDHKTLMKMMEKRGHMPGLSTIIEEPFHTNKADRRKMERERRRLKKAVVARSK* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01145 657 MobiDBLite consensus disorder prediction 642 657 - -
Rops10g01145 657 MobiDBLite consensus disorder prediction 623 657 - -
Rops10g01145 657 SUPERFAMILY TPR-like 433 532 IPR011990 GO:0005515
Rops10g01145 657 PANTHER ARM-REPEAT/TETRATRICOPEPTIDE REPEAT (TPR)-LIKE PROTEIN 27 614 - -
Rops10g01145 657 Gene3D Tetratricopeptide repeat domain 431 561 IPR011990 GO:0005515
Rops10g01145 657 SMART arm_5 136 177 IPR000225 GO:0005515
Rops10g01145 657 MobiDBLite consensus disorder prediction 1 25 - -
Rops10g01145 657 SUPERFAMILY ARM repeat 113 354 IPR016024 -
Rops10g01145 657 Gene3D - 97 417 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01145 Rops-Chr10 23611941 23614103 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01145 - - gmx:100777591 967.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01145 10 23611941 23614103 Rops10g01145 10 23611941 23614103 ECH