Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01141 ATGAAGCTTGTGTTTGCAAATGCACTTCTTGTGTTCCTTGTCCTCAGCTCCTCTTTGTTGGAAGTCTCAATGGCTGGTTCAGCTTTTTGTGACACCAAGTGCTCACAGAGGTGCTCCAAAGCTTCGATTCAAGACAGATGCTTGAAGTTCTGTGGGATCTGCTGTGAGAAGTGTAACTGTGTGCCATCTGGGACTTATGGGAACAAAGATGAGTGTCCTTGCTACAGGGACTTGAAGAACTCCAAGGGCAAAGGCAAATGCCCTTAA 267 0.4644 MKLVFANALLVFLVLSSSLLEVSMAGSAFCDTKCSQRCSKASIQDRCLKFCGICCEKCNCVPSGTYGNKDECPCYRDLKNSKGKGKCP* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01141 88 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 7 88 - -
Rops10g01141 88 Pfam Gibberellin regulated protein 29 88 IPR003854 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01141 Rops-Chr10 23581604 23582009 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01141 - - mtr:25489929 154.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01141 10 23581604 23582009 Rops6g03095 6 54135949 54136320 ECH
Rops10g01141 10 23581604 23582009 Rops10g01141 10 23581604 23582009 ECH
Rops9g02172 9 39721768 39722532 Rops10g01141 10 23581604 23582009 PCT