Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01131 ATGGGGAGTTCCAAGACAGTTACTGCGGTTACCGACAATTCCAATAGCAGCAGCACTACTCAGACTGAAACCGAAAATCACGACAACAACAACAACAACGTTGCTCCTTATGTTGTAGGAGAGAAGGTCTTAGCCTACCACACACTTTGTATTTACGAAGCCAAGGTTAGGCAAGTTGACTACAAGCTTAAAGGGTGGAGGTTCTTTGTTCATTATCTTGGTTGGAAGAAAAGTTGGGATGAATGGGTTGGTGTTGATCGTTTGATGAAGAACACTGAGGAAAATATGCGCAAGAAAAAAGCCCTCGATGAGAAATATGGCAACGACAAGAATGCAAATCGTGCATCACTTACTAAATCGAAGAGTTCTAATGTAGCAAGAGGCAGGAAACGAAAGAATGAATCTCTGATCAAGGGAAAACCTGTTGTTCATTCTGACAAGCTTGTCAACATTCAGATGCCATCAACACTAAAGAAGCAATTAGTTGATGATTGTGAGTTCATTACCCATTTGGGCAAGCTTGTTAAACTTCCTCGTACTCCTAATGTCAATGACATAGTGAAGAATTATTTTGATTACAGATTGAAGAAATGTGGCTCGATACCTGATTCGGTTGAAGAAATTATGAAAGGATTGTGTTGTTACTTTGACAAAGCACTGCCAGTGATGCTCTTGTACCAGAATGAACGTCAACAGTACCAAGAAGCTTGTCTAAATAATATCTTTCCCTCTGCTGTATATGGTGCTGAGCATTTGTTACGTCTCTTTGTTAAGTTGCCGGAATTATTGGTCCATGCAAGCATTGAAGAAGAGACATTGCTAGAACTTCAGGCACAATTAGTTGACTTTCTCAGGTTCTTGCAAAAAAATCAGAGCACATTTTTCCTTTCTACTTATCATGTCCCAGAAGATATTGAGAACAGCACCAACAAGCAAGGTGACTAA 945 0.3989 MGSSKTVTAVTDNSNSSSTTQTETENHDNNNNNVAPYVVGEKVLAYHTLCIYEAKVRQVDYKLKGWRFFVHYLGWKKSWDEWVGVDRLMKNTEENMRKKKALDEKYGNDKNANRASLTKSKSSNVARGRKRKNESLIKGKPVVHSDKLVNIQMPSTLKKQLVDDCEFITHLGKLVKLPRTPNVNDIVKNYFDYRLKKCGSIPDSVEEIMKGLCCYFDKALPVMLLYQNERQQYQEACLNNIFPSAVYGAEHLLRLFVKLPELLVHASIEEETLLELQAQLVDFLRFLQKNQSTFFLSTYHVPEDIENSTNKQGD* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01131 314 CDD CBD_MSL3_like 41 97 - -
Rops10g01131 314 PANTHER MORTALITY FACTOR 4-LIKE PROTEIN 37 303 IPR008676 GO:0005634|GO:0006325|GO:0006355
Rops10g01131 314 MobiDBLite consensus disorder prediction 99 131 - -
Rops10g01131 314 Gene3D - 20 118 - -
Rops10g01131 314 FunFam Chromatin modification-related protein EAF3 145 308 - -
Rops10g01131 314 ProSiteProfiles MRG domain profile. 145 312 - -
Rops10g01131 314 Pfam MRG 145 299 IPR026541 -
Rops10g01131 314 MobiDBLite consensus disorder prediction 1 34 - -
Rops10g01131 314 Pfam RNA binding activity-knot of a chromodomain 38 88 IPR025995 -
Rops10g01131 314 SUPERFAMILY Chromo domain-like 28 169 IPR016197 -
Rops10g01131 314 Gene3D MRG domain 144 312 IPR038217 -
Rops10g01131 314 PIRSF EAF3_MRG15 30 312 IPR008676 GO:0005634|GO:0006325|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01131 Rops-Chr10 23447655 23452166 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01131 K11339 - gmx:100777259 466.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01131 10 23447655 23452166 Rops10g01131 10 23447655 23452166 ECH