Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01085 ATGCCTCAGGTTGTCATTCACGGGCAGAATATTCTGTATAGCAAGTCCTTTGCCAGTGTCAGATCAGAGCCATACTTACAGAAACCAATTGAGTCTAGAATTTCCCATGTAGTTTTCAGCTTGTTTCATAGACACAGTCATGGCAAACTATGTCTTGGTGGGACAAAAATTGAACCTGTAATACAAATCAGGCACACATTCTGCCCTAGTAGGATAAGAGTTGCAGAGGAACATCAAGAAGATTTGCCTGATGAAGATGATGATCTCTGTCCCGTTGAATGTGTAAGAGAATTCAAGAATGATGAAGAGTTCTGCAGAATTCTGGACAAGGCTAAAGAAACTGGATCTTTAGTCGTGGTAGATTTCTTCCGCACCTCTTGTGGAAGCTGTAAGTATATAGAGCAGGGTTTTGCCAAATTGTGCAAGAAATCTGGTGACCATGAAGCTCCAGTAATCTTTCTAAAGCATAATGTAATTGATGAGTATGATGAGCAATCCGAGGTTGCTGAGCGACTTAGAATCAGGGCCGTGCCCCTTTTCCACTTCTACAAAGATGGGGTCCTATTGGAAGCATTCCCAACCAGGGACAAAGAGAGGATTGTTGCAGCCATCCTCAAGTACTCATCTCTTGAAGCCGAAGATATTTTGAGTTAA 654 0.422 MPQVVIHGQNILYSKSFASVRSEPYLQKPIESRISHVVFSLFHRHSHGKLCLGGTKIEPVIQIRHTFCPSRIRVAEEHQEDLPDEDDDLCPVECVREFKNDEEFCRILDKAKETGSLVVVDFFRTSCGSCKYIEQGFAKLCKKSGDHEAPVIFLKHNVIDEYDEQSEVAERLRIRAVPLFHFYKDGVLLEAFPTRDKERIVAAILKYSSLEAEDILS* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01085 217 Pfam Thioredoxin 100 204 IPR013766 -
Rops10g01085 217 ProSiteProfiles Thioredoxin domain profile. 69 209 IPR013766 -
Rops10g01085 217 Gene3D Glutaredoxin 73 211 - -
Rops10g01085 217 FunFam Thioredoxin-like 4, chloroplastic 75 211 - -
Rops10g01085 217 PANTHER THIOREDOXIN-LIKE 4, CHLOROPLASTIC 73 213 IPR044176 -
Rops10g01085 217 CDD TRX_family 108 204 - -
Rops10g01085 217 SUPERFAMILY Thioredoxin-like 79 207 IPR036249 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01085 - - gmx:100809735 352.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01085 10 22607967 22610603 Rops10g01085 10 22607967 22610603 ECH