Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01083 ATGGGTGGCTCTCACAGTCGTGAAGAATTTCCAGAAACTTCCGACTCAGAACAAGAAGAAGAAGATGAACAAAACTACGAAGATGCCACCGAAGGAGGTGGTTCAGAGGAACGGAGAATCAAAACGCCGTCATCACTGGATGACGTGGAAGCTAAGCTCAAAGCCCTCAAACTCAAATACTCTTCTTCAAACCCCAACGTAAAAAACGCCGTTAAACTTTACCTCCATGTCGGTGGTAGCACCCCCAAAGCCAAATGGGTAACCTCTGAGAAGTTCATCACTTACTCTTTCGTCAAAACGCACCGTATTGACGGAGACAACGACGACGATGAAGACACAGAAGAAGAAGAAAATGGTGTTGAATCTTGGTGGGTATTGAAGGTTGGTTTGAAAATTCGATCCAAGGTTTCCGCAGAAATGCAATTGAAAACGTTCAGCGACCAACGGCGCGTGGATTTCGTGGCGCGTGCAGTGTGGGCTATGAAATTCTTCACTGAACAAGATTACAATGAGTTTGTCTCACAGTTTCAGAAGTGTATGTTTGAGAACACGCATCGTGTTGAGGCTACAGAAGAGAACAAGCTCAAAATTTATGGTAAGGATTTCATGGGTTGGGCTAAACCAGAAGCTGCAGATGATTCAATGTGGGAAGATGCAGACGAAAGCTTCTCCAAAAGCCCTAATTCCGCCACGCCGGTGAGACCGAGCCAGGATTTGATGGAAGAGTTCGAGGAAGCTGCAAATGGTGGAATTCAAAGCTTGGCATTGGGTGCTTTGGACAACAGTTTCTTGGTAAACGACAATGGGATTCAGGTTGTGAAGAATTTCTCTCATGGGATACAAGGAAAAGGTGCTTTTGTTAACTTTGGTGGTGGATATCAAAGTGGGTCTTCGTCTTTGGTGCATTCAACCCCGAAAAAAACGCTTTTGATGAAGGCTGAGACCAACATGCTTCTAATGAGTCCAATGGGTGGTGGAAAGCTTCATTCAATGGGGCTTCATCAGCTTGATATTGAAACTGGGAAGGTTGTGACTGAATGGAAGTTTGGAAAGGATGGAACTGAGATTACAATGAGAGATATCGCCAATGATAGTAAAGGTGCTCAATTGGATCCTTCTGGATCCACTTTTCTAGGTTTGGATGATAATAGGCTTTGTAGGTGGGACATGCGTGATCGAAATGGAATAGTTCAGAATCTTGCTGATTCTAATTCCAATATTAATACCCCCGTGTTGAATTGGGCACAAGGGCATCAGTTCTCAAGGGGTACTAACTTTCAATGCTTTGCTACCACTGGTGATGGTTCCATTGTTGTTGGGTCTCTTGATGGGAAGATAAGACTCTATTCGATTAACTCTATGAGGCAGGCAAAGACAGCTTTTCCTGGCCTTGGTTCACCTGTTACTCATGTTGATGTTACTTATGATGGCAAGTGGATTGTGGGTACAACGGATACCTACTTGGTTATTATTTGTACCCTCTTTACTGATAAAGATGGAAAAACAAAAACTGGTTTTGGTGGACGCATGGGAAATAGGATTGCTGCTCCAAGGTTGCTCAAGCTTACTCCTCTTGATTCACATTTGGCCGGACAGAATAACAAATTCCGTAATGCTCAGTTTTCATGGGTGACGGAGAATGGGAGGCAGGAGCGACATATAGTAGCTACAGTGGGGAAGTTCAGTGTGATATGGAACTTCCAACAAGTCAAGGATGGTTCTCATGAGTGCTACCGTAACCAACAGGGTCTAAAGAGCTGCTACTGCTACAAGATAGTCCTCAGGGATGATTCCATTGTTGATAGCCGATTTATGCATGACAAGTTTGCAGTCACTGATTCTCCTGAGGCTCCGTTGGTAATAGCCACCCCAATGAAAGTTAGCTCGATCAGCTTATCCAGCAGGCGATGA 1911 0.4437 MGGSHSREEFPETSDSEQEEEDEQNYEDATEGGGSEERRIKTPSSLDDVEAKLKALKLKYSSSNPNVKNAVKLYLHVGGSTPKAKWVTSEKFITYSFVKTHRIDGDNDDDEDTEEEENGVESWWVLKVGLKIRSKVSAEMQLKTFSDQRRVDFVARAVWAMKFFTEQDYNEFVSQFQKCMFENTHRVEATEENKLKIYGKDFMGWAKPEAADDSMWEDADESFSKSPNSATPVRPSQDLMEEFEEAANGGIQSLALGALDNSFLVNDNGIQVVKNFSHGIQGKGAFVNFGGGYQSGSSSLVHSTPKKTLLMKAETNMLLMSPMGGGKLHSMGLHQLDIETGKVVTEWKFGKDGTEITMRDIANDSKGAQLDPSGSTFLGLDDNRLCRWDMRDRNGIVQNLADSNSNINTPVLNWAQGHQFSRGTNFQCFATTGDGSIVVGSLDGKIRLYSINSMRQAKTAFPGLGSPVTHVDVTYDGKWIVGTTDTYLVIICTLFTDKDGKTKTGFGGRMGNRIAAPRLLKLTPLDSHLAGQNNKFRNAQFSWVTENGRQERHIVATVGKFSVIWNFQQVKDGSHECYRNQQGLKSCYCYKIVLRDDSIVDSRFMHDKFAVTDSPEAPLVIATPMKVSSISLSSRR* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01083 636 MobiDBLite consensus disorder prediction 31 46 - -
Rops10g01083 636 FunFam Vacuolar import/degradation Vid27-related protein 315 608 - -
Rops10g01083 636 SUPERFAMILY WD40 repeat-like 332 496 IPR036322 GO:0005515
Rops10g01083 636 PANTHER VACUOLAR IMPORT AND DEGRADATION PROTEIN 27 1 634 IPR040458 -
Rops10g01083 636 MobiDBLite consensus disorder prediction 13 30 - -
Rops10g01083 636 Pfam VID27 C-terminal WD40-like domain 260 579 IPR013863 -
Rops10g01083 636 MobiDBLite consensus disorder prediction 1 46 - -
Rops10g01083 636 Gene3D - 314 578 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01083 Rops-Chr10 22596683 22600274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01083 48 636 Acyl Lipid Metabolism Gene Families AT3G19240 68.403 0.0 835
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01083 - - gmx:100810233 994.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01083 10 22596683 22600274 Rops10g01083 10 22596683 22600274 ECH