Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01080 ATGGAGTCACGAAGACAGTGGAACCCGCTTCTATCATTTTCGAGGTTCATCCATCAAAACTGCCTCCACCTTGTTACTCGTTTGGAAGACACCAAGCGATTCGCTGGAACCCTACTTCAAGCTCATGCTCGTCCCAAACACGCCCTTGCCGCTACTCTGAGTTCCCACCACGTTTCTAAGTCCCTCGCCGGCACCTCAGTTTTCACCGTCAGCAACTCCAACAATGAGTTTGTTCTTATCTCCGATGCCGATGGTGCTAAGTCCATTGGATTGCTTTGCTTTCGCCAAGAAGACGCTGAAGCCTTCCTTGCTCAAGTTCGATCACGGAAAAGAGAACTTCGAGGCAATGCTAGGGTTGTTCCCATAACTCTTGACCAGGTATACATGTTGAAGGTTGAAGGTATTGCATTCCGATTTTTACCTGATCCTATTCAAATAAAGAATGCTTTGGAGCTCAGACCAGCCAATAAGGGAGGTTTTGATGGAGTTCCTGTTTTTCAGTCAGACCTTTTGGTTGTGAAGAAGAAGAATAAGCGTTACTGCCCTGTATATTTCTCTAAGGAAGATATTGAACAGGAACTGTCCAAGGTTTCCAGGGCATCTAGAGGTGCTGGAGCTTCTCAGCATATAATGGTTGGTAGTTTCGAAGATGTACTGAAGAAGATGGAGATGAGTGAAAGGAACTCAGGATGGGAGGATTTGATTTTTATTCCACCGGGAAAAAGTCACTCTCAACACATACAAGAAATTAATGCTTGA 759 0.4506 MESRRQWNPLLSFSRFIHQNCLHLVTRLEDTKRFAGTLLQAHARPKHALAATLSSHHVSKSLAGTSVFTVSNSNNEFVLISDADGAKSIGLLCFRQEDAEAFLAQVRSRKRELRGNARVVPITLDQVYMLKVEGIAFRFLPDPIQIKNALELRPANKGGFDGVPVFQSDLLVVKKKNKRYCPVYFSKEDIEQELSKVSRASRGAGASQHIMVGSFEDVLKKMEMSERNSGWEDLIFIPPGKSHSQHIQEINA* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01080 252 PANTHER PROTEIN TIC 22, CHLOROPLASTIC 34 248 IPR007378 GO:0015031
Rops10g01080 252 Gene3D - 62 140 - -
Rops10g01080 252 Pfam Tic22-like family 10 249 IPR007378 GO:0015031
Rops10g01080 252 Gene3D - 141 224 - -
Rops10g01080 252 FunFam Protein TIC 22, chloroplastic 57 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01080 Rops-Chr10 22579997 22584155 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01080 - - gmx:100802935 405.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01080 10 22579997 22584155 Rops10g01080 10 22579997 22584155 ECH