Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops10g01072 ATGAAGGTATTGGTGACAGGTGCATCTGGTTACCTTGGTGGAAGGCTCTGTGACGCTCTCCTCCGACAAGGTTACTCCGTTAGGGTCCTCGTCAGACTCACCAGCGATCTCTCCGCCGTTCCTCCGCCGTCAGAAATCGTCTACGGAGACATCACTGACTATGCCTCTCTCCTCGCCGCCTGCTCCGACTGCTCCGTCGTCTTCCACCTCGCCGCTCTCGTCGAGCCCTGGCTCCCCGATCCTTCTAGATTCTTCTCCGTTAATGTTGGAGGATTGAAAAATGTGTTGAAGGCGGTGAAGGAAACCAAAACGGTTGAGAAGCTCATCTATACGTCGTCGTTTTTCGCTTTAGGACCAACTGACGATGGAGGCATTGCTGATGAGGGTCAAGTTCATCATGAGAAATTTTTCTGCACGGAATATGAGAAATCAAAGGTCGCTGCTGATAAGATTGCGTTGCAAGCTGCATCCGAGGGTGTTCCAATAGTGTTGCTTTATCCTGGTGTGATCTATGGACCTGGCAAGGTCACTGCAGGAAACGTTGTTGCACGAATGCTTGTAGAACGGTTTAGTGGTCGATTACCTGGTTACATAGGGAATGGAAATGATAAATATTCGTTCAGCCATGTTGATGATGTGGTGGAAGGGCACATTGCAGCAATGAAAAAAGGACAACCTGGGGATAGGTATCTACTAACGGGTGAAAATGCATCGTTCAAGCATGTTTTTGATATGGCTGCTGTGATTACTGATACTAGAAAACCAATACTTAGCATCCCTTTGTGGGTGATTGAAGTATATGGCTGGTTATCGGTTTTTTTCTCTCGAATCACTGGAAAGTTACCCCTGATCAGTCCACCAACGGTGCATGCTTTAAGACATCGTTGGGAGTATTCGTGCGAGAAAGCTAGAAGGGAGCTAGATTACAGGCCCAGAAGCCTGAAAGAAGGACTTGCAGAGGTACTGCTCTGGTTGAAGGACTTGGGATTGATCAGATATTAG 1002 0.478 MKVLVTGASGYLGGRLCDALLRQGYSVRVLVRLTSDLSAVPPPSEIVYGDITDYASLLAACSDCSVVFHLAALVEPWLPDPSRFFSVNVGGLKNVLKAVKETKTVEKLIYTSSFFALGPTDDGGIADEGQVHHEKFFCTEYEKSKVAADKIALQAASEGVPIVLLYPGVIYGPGKVTAGNVVARMLVERFSGRLPGYIGNGNDKYSFSHVDDVVEGHIAAMKKGQPGDRYLLTGENASFKHVFDMAAVITDTRKPILSIPLWVIEVYGWLSVFFSRITGKLPLISPPTVHALRHRWEYSCEKARRELDYRPRSLKEGLAEVLLWLKDLGLIRY* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops10g01072 333 CDD AR_FR_like_1_SDR_e 3 325 - -
Rops10g01072 333 Gene3D - 1 332 - -
Rops10g01072 333 FunFam NAD(P)-binding Rossmann-fold superfamily protein 1 332 - -
Rops10g01072 333 PANTHER PROTEIN YEEZ 1 322 - -
Rops10g01072 333 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 329 IPR036291 -
Rops10g01072 333 Pfam NAD dependent epimerase/dehydratase family 3 230 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops10g01072 Rops-Chr10 22520233 22522342 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops10g01072 3 234 Miscellaneous Gene Families AT1G09510 31.102 9.46e-21 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops10g01072 K15891 - gmx:100792747 583.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops10g01072 10 22520233 22522342 Rops10g01072 10 22520233 22522342 ECH